Magnesium in PDB 6hq4: Structure of Eal Enzyme BD1971 - Camp Bound Form

The structure of Structure of Eal Enzyme BD1971 - Camp Bound Form, PDB code: 6hq4 was solved by A.L.Lovering, I.T.Cadby, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	65.66 / 2.63
Space group	P 31
Cell size a, b, c (Å), α, β, γ (°)	82.380, 82.380, 131.320, 90.00, 90.00, 120.00
R / Rfree (%)	24.1 / 28.6

The binding sites of Magnesium atom in the Structure of Eal Enzyme BD1971 - Camp Bound Form (pdb code 6hq4). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of Eal Enzyme BD1971 - Camp Bound Form, PDB code: 6hq4:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of Eal Enzyme BD1971 - Camp Bound Form


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Eal Enzyme BD1971 - Camp Bound Form within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg902 b:72.1 occ:1.00 OD2 A:ASP306 2.0 90.9 1.0 OE2 A:GLU178 2.3 70.3 1.0 OE1 A:GLU277 2.4 81.4 1.0 OD1 A:ASN245 2.5 71.9 1.0 CG A:ASP306 3.0 91.2 1.0 CD A:GLU178 3.3 70.6 1.0 OD1 A:ASP306 3.4 97.2 1.0 CG A:ASN245 3.4 70.6 1.0 CD A:GLU277 3.6 79.8 1.0 ND2 A:ASN245 3.6 69.0 1.0 OE1 A:GLU178 3.7 70.3 1.0 OE2 A:GLU277 4.2 79.4 1.0 NZ A:LYS327 4.2 77.8 1.0 CB A:ASP306 4.3 87.5 1.0 CG A:GLU178 4.5 70.4 1.0 CB A:GLU277 4.5 81.4 1.0 CG A:GLU277 4.6 80.7 1.0 CD A:LYS327 4.8 77.8 1.0 CB A:ASN245 4.8 70.4 1.0 OE1 A:GLU363 4.9 83.8 1.0

Magnesium binding site 2 out of 2 in the Structure of Eal Enzyme BD1971 - Camp Bound Form


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of Eal Enzyme BD1971 - Camp Bound Form within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg902 b:82.8 occ:1.00 OD2 B:ASP306 2.1 89.7 1.0 OE2 B:GLU178 2.4 77.4 1.0 OD1 B:ASN245 2.6 73.2 1.0 OE1 B:GLU277 2.8 86.0 1.0 CG B:ASP306 3.2 87.5 1.0 CD B:GLU178 3.4 73.7 1.0 CG B:ASN245 3.4 70.5 1.0 ND2 B:ASN245 3.5 71.1 1.0 OD1 B:ASP306 3.6 87.8 1.0 OE1 B:GLU178 3.8 75.8 1.0 CD B:GLU277 4.0 84.2 1.0 CB B:ASP306 4.5 84.2 1.0 NZ B:LYS327 4.6 73.3 1.0 OE2 B:GLU277 4.6 82.8 1.0 CG B:GLU178 4.6 72.8 1.0 CB B:ASN245 4.8 70.6 1.0 CB B:GLU277 4.8 79.4 1.0

I.T.Cadby, S.M.Basford, R.Nottingham, R.Meek, R.Lowry, C.Lambert, M.Tridgett, R.Till, R.Ahmad, R.Fung, L.Hobley, W.S.Hughes, P.J.Moynihan, R.E.Sockett, A.L.Lovering. Nucleotide Signaling Pathway Convergence in A Camp-Sensing Bacterial C-Di-Gmp Phosphodiesterase. Embo J. V. 38 00772 2019.
ISSN: ESSN 1460-2075
PubMed: 31355487
DOI: 10.15252/EMBJ.2018100772