Magnesium in PDB 6j72: Crystal Structure of Inia From Mycobacterium Smegmatis with Gtp Bound

The structure of Crystal Structure of Inia From Mycobacterium Smegmatis with Gtp Bound, PDB code: 6j72 was solved by M.F.Wang, X.Y.Guo, J.J.Hu, J.Li, Z.H.Rao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.50 / 2.20
Space group	P 64
Cell size a, b, c (Å), α, β, γ (°)	91.514, 91.514, 139.494, 90.00, 90.00, 120.00
R / Rfree (%)	18.5 / 22.1

The binding sites of Magnesium atom in the Crystal Structure of Inia From Mycobacterium Smegmatis with Gtp Bound (pdb code 6j72). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Inia From Mycobacterium Smegmatis with Gtp Bound, PDB code: 6j72:

Magnesium binding site 1 out of 1 in the Crystal Structure of Inia From Mycobacterium Smegmatis with Gtp Bound


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Inia From Mycobacterium Smegmatis with Gtp Bound within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg702 b:42.5 occ:1.00 O1G A:GTP701 2.0 41.9 1.0 OG1 A:THR70 2.0 44.4 1.0 OG A:SER50 2.0 36.1 1.0 O1B A:GTP701 2.1 30.8 1.0 O A:HOH810 2.1 36.7 1.0 O A:HOH852 2.2 34.8 1.0 CB A:SER50 3.0 37.2 1.0 CB A:THR70 3.1 45.2 1.0 PG A:GTP701 3.3 46.8 1.0 PB A:GTP701 3.4 32.3 1.0 O3B A:GTP701 3.6 46.5 1.0 N A:SER50 3.9 38.2 1.0 N A:THR70 3.9 60.2 1.0 OD2 A:ASP141 3.9 33.9 1.0 O A:ARG63 4.0 0.1 1.0 CA A:SER50 4.0 35.4 1.0 O2A A:GTP701 4.0 44.0 1.0 CG2 A:THR70 4.0 42.8 1.0 O3G A:GTP701 4.1 47.0 1.0 CA A:THR70 4.1 49.4 1.0 OD1 A:ASP141 4.2 34.5 1.0 O2B A:GTP701 4.2 36.2 1.0 O2G A:GTP701 4.3 45.9 1.0 O A:THR142 4.4 34.0 1.0 CB A:SER69 4.4 85.4 1.0 CG A:ASP141 4.4 33.2 1.0 O3A A:GTP701 4.5 45.7 1.0 PA A:GTP701 4.7 37.8 1.0 CB A:LYS49 4.8 26.9 1.0 O1A A:GTP701 4.9 33.8 1.0 NZ A:LYS49 4.9 31.6 1.0 CE A:LYS49 4.9 30.9 1.0 C A:LYS49 5.0 36.1 1.0 C A:SER69 5.0 72.3 1.0

M.Wang, X.Guo, X.Yang, B.Zhang, J.Ren, A.Liu, Y.Ran, B.Yan, F.Chen, L.W.Guddat, J.Hu, J.Li, Z.Rao. Mycobacterial Dynamin-Like Protein Inia Mediates Membrane Fission. Nat Commun V. 10 3906 2019.
ISSN: ESSN 2041-1723
PubMed: 31467269
DOI: 10.1038/S41467-019-11860-Z