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Magnesium in PDB 6lzu: F411A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi Co-Crystalized with Chitobiose.

Protein crystallography data

The structure of F411A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi Co-Crystalized with Chitobiose., PDB code: 6lzu was solved by Y.Kitaoku, P.Ubonbal, L.T.Tran, R.C.Robinson, W.Suginta, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.15 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 62.317, 57.231, 82.017, 90, 100.49, 90
R / Rfree (%) 18.6 / 23.4

Other elements in 6lzu:

The structure of F411A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi Co-Crystalized with Chitobiose. also contains other interesting chemical elements:

Calcium (Ca) 2 atoms
Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the F411A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi Co-Crystalized with Chitobiose. (pdb code 6lzu). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the F411A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi Co-Crystalized with Chitobiose., PDB code: 6lzu:

Magnesium binding site 1 out of 1 in 6lzu

Go back to Magnesium Binding Sites List in 6lzu
Magnesium binding site 1 out of 1 in the F411A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi Co-Crystalized with Chitobiose.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of F411A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi Co-Crystalized with Chitobiose. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg605

b:24.8
occ:1.00
O A:HOH720 2.4 23.8 1.0
OE1 A:GLN175 2.6 34.8 1.0
O A:HOH755 2.6 38.0 1.0
O A:HOH913 2.9 28.5 1.0
CD A:GLN175 3.6 35.3 1.0
NZ A:LYS210 4.2 20.9 1.0
NE2 A:GLN175 4.4 37.0 1.0
O A:GLN200 4.4 14.0 1.0
CB A:GLN175 4.6 26.1 1.0
CG A:GLN175 4.6 32.4 1.0
O A:GLN175 4.8 15.5 1.0

Reference:

Y.Kitaoku, P.Ubonbal, L.T.Tran, R.C.Robinson, W.Suginta. Structural Insight Into Chitin-Specific Solute-Binding Protein From Vibrio Harveyi To Be Published.
Page generated: Wed Aug 13 11:57:21 2025

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