Magnesium in PDB 6n7s: Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (Form II)

Enzymatic activity of Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (Form II)

Magnesium Binding Sites:

Magnesium binding site 1 out of 4 in 6n7s

Magnesium Binding Sites List in 6n7s

Magnesium binding site 1 out of 4 in the Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (Form II)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (Form II) within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg701 b:48.9 occ:1.00 O3A B:TTP700 2.2 57.6 1.0 O1G B:TTP700 2.3 57.6 1.0 OG B:SER319 2.4 58.5 1.0 OE1 B:GLN343 2.5 76.8 1.0 O1B B:TTP700 2.6 57.6 1.0 PB B:TTP700 2.7 57.6 1.0 O3B B:TTP700 3.2 57.6 1.0 CD B:GLN343 3.2 76.8 1.0 CB B:SER319 3.2 58.5 1.0 O2A B:TTP700 3.2 57.6 1.0 PA B:TTP700 3.2 57.6 1.0 PG B:TTP700 3.3 57.6 1.0 NE2 B:GLN343 3.3 76.8 1.0 O1A B:TTP700 3.9 57.6 1.0 O2B B:TTP700 4.2 57.6 1.0 O3G B:TTP700 4.2 57.6 1.0 O2G B:TTP700 4.4 57.6 1.0 N B:SER319 4.4 58.5 1.0 CA B:SER319 4.4 58.5 1.0 CG B:GLN343 4.6 76.8 1.0 O5' B:TTP700 4.7 57.6 1.0 NE A:ARG522 4.7 72.8 1.0 CZ A:ARG522 4.8 72.8 1.0 CD A:ARG522 4.9 72.8 1.0 NH1 A:ARG522 4.9 72.8 1.0 C B:LYS318 5.0 54.1 1.0

Magnesium binding site 2 out of 4 in 6n7s

Magnesium Binding Sites List in 6n7s

Magnesium binding site 2 out of 4 in the Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (Form II)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (Form II) within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg701 b:33.3 occ:1.00 OE1 C:GLN343 1.8 42.6 1.0 O1G C:TTP700 2.1 36.5 1.0 O1B C:TTP700 2.3 36.5 1.0 CD C:GLN343 2.4 42.6 1.0 NE2 C:GLN343 2.4 42.6 1.0 OG C:SER319 3.1 40.1 1.0 O2A C:TTP700 3.2 36.5 1.0 PB C:TTP700 3.3 36.5 1.0 O3A C:TTP700 3.3 36.5 1.0 O1A C:TTP700 3.4 36.5 1.0 PG C:TTP700 3.4 36.5 1.0 PA C:TTP700 3.5 36.5 1.0 CB C:SER319 3.6 40.1 1.0 O3B C:TTP700 3.7 36.5 1.0 CG C:GLN343 3.9 42.6 1.0 O3G C:TTP700 4.2 36.5 1.0 N C:SER319 4.3 40.1 1.0 CG C:LYS318 4.5 39.8 1.0 OD1 C:ASP424 4.5 53.1 1.0 O2G C:TTP700 4.5 36.5 1.0 CA C:SER319 4.6 40.1 1.0 O2B C:TTP700 4.6 36.5 1.0 C C:LYS318 4.8 39.8 1.0 CB C:GLN343 4.8 42.6 1.0

Magnesium binding site 3 out of 4 in 6n7s

Magnesium Binding Sites List in 6n7s

Magnesium binding site 3 out of 4 in the Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (Form II)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (Form II) within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg701 b:47.8 occ:1.00 O2G D:TTP700 2.0 41.9 1.0 O2B D:TTP700 2.2 41.9 1.0 OE1 D:GLN343 2.3 53.0 1.0 OG D:SER319 2.7 45.2 1.0 O2A D:TTP700 2.8 41.9 1.0 CD D:GLN343 2.8 53.0 1.0 PB D:TTP700 2.9 41.9 1.0 PG D:TTP700 3.0 41.9 1.0 CB D:SER319 3.1 45.2 1.0 O3B D:TTP700 3.2 41.9 1.0 O3A D:TTP700 3.2 41.9 1.0 NE2 D:GLN343 3.3 53.0 1.0 PA D:TTP700 3.4 41.9 1.0 O1G D:TTP700 3.5 41.9 1.0 CG D:GLN343 3.7 53.0 1.0 O1A D:TTP700 3.8 41.9 1.0 N D:SER319 3.9 45.2 1.0 CA D:SER319 4.1 45.2 1.0 O3G D:TTP700 4.3 41.9 1.0 C D:LYS318 4.4 47.7 1.0 O1B D:TTP700 4.4 41.9 1.0 CB D:GLN343 4.6 53.0 1.0 O D:LYS318 4.7 47.7 1.0 N D:LYS318 4.9 47.7 1.0 OD1 D:ASP424 5.0 51.1 1.0 O5' D:TTP700 5.0 41.9 1.0

Magnesium binding site 4 out of 4 in 6n7s

Magnesium Binding Sites List in 6n7s

Magnesium binding site 4 out of 4 in the Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (Form II)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Structure of Bacteriophage T7 E343Q Mutant GP4 Helicase-Primase in Complex with Ssdna, Dttp, Ac Dinucleotide and Ctp (Form II) within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg701 b:85.0 occ:1.00 OE1 E:GLN343 1.9 80.1 1.0 O1B E:TTP700 2.0 61.8 1.0 O2B E:TTP700 2.3 61.8 1.0 CD E:GLN343 2.5 80.1 1.0 NE2 E:GLN343 2.6 80.1 1.0 PB E:TTP700 2.6 61.8 1.0 O2G E:TTP700 3.2 61.8 1.0 OG E:SER319 3.3 61.4 1.0 O3B E:TTP700 3.4 61.8 1.0 OD2 E:ASP424 3.4 77.7 1.0 OD1 E:ASP424 3.5 77.7 1.0 CG E:ASP424 3.7 77.7 1.0 PG E:TTP700 3.9 61.8 1.0 CG E:GLN343 3.9 80.1 1.0 O3A E:TTP700 4.0 61.8 1.0 CB E:SER319 4.1 61.4 1.0 NZ E:LYS318 4.4 65.9 1.0 CB E:GLN343 4.5 80.1 1.0 O1G E:TTP700 4.7 61.8 1.0 O1A E:TTP700 4.8 61.8 1.0 PA E:TTP700 4.9 61.8 1.0 N E:SER319 5.0 61.4 1.0

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