Atomistry » Magnesium » PDB 6ojf-6oqz » 6omf
Atomistry »
  Magnesium »
    PDB 6ojf-6oqz »
      6omf »

Magnesium in PDB 6omf: Cryoem Structure of Sigmas-Transcription Initiation Complex with Activator Crl

Enzymatic activity of Cryoem Structure of Sigmas-Transcription Initiation Complex with Activator Crl

All present enzymatic activity of Cryoem Structure of Sigmas-Transcription Initiation Complex with Activator Crl:
2.7.7.6;

Other elements in 6omf:

The structure of Cryoem Structure of Sigmas-Transcription Initiation Complex with Activator Crl also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryoem Structure of Sigmas-Transcription Initiation Complex with Activator Crl (pdb code 6omf). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryoem Structure of Sigmas-Transcription Initiation Complex with Activator Crl, PDB code: 6omf:

Magnesium binding site 1 out of 1 in 6omf

Go back to Magnesium Binding Sites List in 6omf
Magnesium binding site 1 out of 1 in the Cryoem Structure of Sigmas-Transcription Initiation Complex with Activator Crl


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryoem Structure of Sigmas-Transcription Initiation Complex with Activator Crl within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg1501

b:0.6
occ:1.00
OD1 D:ASP462 2.1 0.8 1.0
OD2 D:ASP464 2.2 0.0 1.0
OD2 D:ASP462 2.5 0.8 1.0
OD1 D:ASP464 2.6 0.0 1.0
CG D:ASP462 2.6 0.8 1.0
CG D:ASP464 2.7 0.0 1.0
CB D:ASP460 3.1 0.5 1.0
OD2 D:ASP460 3.8 0.5 1.0
CG D:ASP460 3.9 0.5 1.0
CA D:ASP460 4.0 0.5 1.0
N D:ASP460 4.1 0.5 1.0
O D:ASP460 4.1 0.5 1.0
CB D:ASP462 4.1 0.8 1.0
CB D:ASP464 4.2 0.0 1.0
C D:ASP460 4.3 0.5 1.0
N D:ASP462 4.6 0.8 1.0
CA D:ASP462 4.8 0.8 1.0
NH2 D:ARG425 4.8 0.4 1.0
N D:ASP464 4.9 0.0 1.0

Reference:

A.J.Cartagena, A.B.Banta, N.Sathyan, W.Ross, R.L.Gourse, E.A.Campbell, S.A.Darst. Structural Basis For Transcription Activation By Crl Through Tethering of Sigmasand Rna Polymerase. Proc.Natl.Acad.Sci.Usa V. 116 18923 2019.
ISSN: ESSN 1091-6490
PubMed: 31484766
DOI: 10.1073/PNAS.1910827116
Page generated: Tue Oct 1 13:26:49 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy