Magnesium in PDB 6qvj: Hsckk (Human CAMSAP1) Decorated 14PF Taxol-Gdp Microtubule

The binding sites of Magnesium atom in the Hsckk (Human CAMSAP1) Decorated 14PF Taxol-Gdp Microtubule (pdb code 6qvj). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Hsckk (Human CAMSAP1) Decorated 14PF Taxol-Gdp Microtubule, PDB code: 6qvj:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Hsckk (Human CAMSAP1) Decorated 14PF Taxol-Gdp Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Hsckk (Human CAMSAP1) Decorated 14PF Taxol-Gdp Microtubule within 5.0Å range: probe atom residue distance (Å) B Occ O:Mg502 b:96.2 occ:1.00 O1B O:GTP501 2.1 96.6 1.0 O1G O:GTP501 2.1 96.6 1.0 PG O:GTP501 2.5 96.6 1.0 O2G O:GTP501 2.6 96.6 1.0 O3B O:GTP501 2.6 96.6 1.0 PB O:GTP501 2.8 96.6 1.0 OE2 O:GLU71 3.0 0.1 1.0 OG1 O:THR145 3.0 0.4 1.0 CD O:GLU71 3.6 0.1 1.0 CB O:THR145 3.7 0.4 1.0 O3A O:GTP501 3.9 96.6 1.0 O2B O:GTP501 4.0 96.6 1.0 O3G O:GTP501 4.0 96.6 1.0 CG O:GLU71 4.2 0.1 1.0 OD2 O:ASP98 4.3 0.9 1.0 OE1 O:GLU71 4.4 0.1 1.0 CB O:GLN11 4.4 95.8 1.0 NZ S:LYS254 4.4 93.8 1.0 OE1 O:GLN11 4.5 95.8 1.0 OD1 O:ASP69 4.5 0.6 1.0 N O:GLN11 4.6 95.8 1.0 CB O:ASP98 4.6 0.9 1.0 CG2 O:THR145 4.6 0.4 1.0 N O:THR145 4.7 0.4 1.0 CA O:THR145 4.9 0.4 1.0 CG O:ASP98 5.0 0.9 1.0

Magnesium binding site 2 out of 2 in the Hsckk (Human CAMSAP1) Decorated 14PF Taxol-Gdp Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Hsckk (Human CAMSAP1) Decorated 14PF Taxol-Gdp Microtubule within 5.0Å range: probe atom residue distance (Å) B Occ X:Mg502 b:70.7 occ:1.00 O1G X:GTP501 2.0 70.5 1.0 O1B X:GTP501 2.0 70.5 1.0 OE2 X:GLU71 2.1 0.7 1.0 PB X:GTP501 2.9 70.5 1.0 CD X:GLU71 2.9 0.7 1.0 PG X:GTP501 2.9 70.5 1.0 O3B X:GTP501 3.0 70.5 1.0 O2G X:GTP501 3.5 70.5 1.0 OE1 X:GLN11 3.5 0.0 1.0 O3A X:GTP501 3.6 70.5 1.0 CB X:GLN11 3.6 0.0 1.0 OE1 X:GLU71 3.6 0.7 1.0 CG X:GLU71 3.7 0.7 1.0 N X:GLN11 4.1 0.0 1.0 NZ U:LYS254 4.1 0.1 1.0 O2B X:GTP501 4.2 70.5 1.0 O1A X:GTP501 4.2 70.5 1.0 O3G X:GTP501 4.3 70.5 1.0 PA X:GTP501 4.4 70.5 1.0 CD X:GLN11 4.4 0.0 1.0 CA X:GLN11 4.4 0.0 1.0 O2A X:GTP501 4.5 70.5 1.0 OG1 X:THR145 4.5 0.5 1.0 CG X:GLN11 4.5 0.0 1.0 OD1 X:ASP69 4.5 0.2 1.0 CB X:THR145 4.8 0.5 1.0 CB X:GLU71 5.0 0.7 1.0

J.Atherton, Y.Luo, S.Xiang, C.Yang, A.Rai, K.Jiang, M.Stangier, A.Vemu, A.D.Cook, S.Wang, A.Roll-Mecak, M.O.Steinmetz, A.Akhmanova, M.Baldus, C.A.Moores. Structural Determinants of Microtubule Minus End Preference in Camsap Ckk Domains. Nat Commun V. 10 5236 2019.
ISSN: ESSN 2041-1723
PubMed: 31748546
DOI: 10.1038/S41467-019-13247-6