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Magnesium in PDB 6ric: Structure of the Core Vaccinia Virus Dna-Dependent Rna Polymerase Complex

Enzymatic activity of Structure of the Core Vaccinia Virus Dna-Dependent Rna Polymerase Complex

All present enzymatic activity of Structure of the Core Vaccinia Virus Dna-Dependent Rna Polymerase Complex:
2.7.7.6;

Other elements in 6ric:

The structure of Structure of the Core Vaccinia Virus Dna-Dependent Rna Polymerase Complex also contains other interesting chemical elements:

Zinc (Zn) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of the Core Vaccinia Virus Dna-Dependent Rna Polymerase Complex (pdb code 6ric). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Core Vaccinia Virus Dna-Dependent Rna Polymerase Complex, PDB code: 6ric:

Magnesium binding site 1 out of 1 in 6ric

Go back to Magnesium Binding Sites List in 6ric
Magnesium binding site 1 out of 1 in the Structure of the Core Vaccinia Virus Dna-Dependent Rna Polymerase Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Core Vaccinia Virus Dna-Dependent Rna Polymerase Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1301

b:49.5
occ:1.00
OD1 A:ASP417 2.1 41.3 1.0
OD1 A:ASP419 2.8 42.6 1.0
CG A:ASP417 3.0 41.3 1.0
CB A:ASP415 3.3 40.6 1.0
OD2 A:ASP417 3.4 41.3 1.0
O A:ASP417 3.4 41.3 1.0
CG A:ASP419 3.5 42.6 1.0
OD2 A:ASP415 3.6 40.6 1.0
CG A:ASP415 3.7 40.6 1.0
OD2 A:ASP419 3.8 42.6 1.0
O A:ASP415 3.8 40.6 1.0
C A:ASP417 4.2 41.3 1.0
CB A:ASP417 4.2 41.3 1.0
C A:ASP415 4.2 40.6 1.0
N A:ASP417 4.2 41.3 1.0
CA A:ASP415 4.3 40.6 1.0
CA A:ASP417 4.4 41.3 1.0
OD1 A:ASP415 4.6 40.6 1.0
CB A:ASP419 4.7 42.6 1.0
N A:ASP415 4.8 40.6 1.0
N A:ASP419 4.9 42.6 1.0

Reference:

H.S.Hillen, J.Bartuli, C.Grimm, C.Dienemann, K.Bedenk, A.A.Szalay, U.Fischer, P.Cramer. Structural Basis of Poxvirus Transcription: Transcribing and Capping Vaccinia Complexes. Cell V. 179 1525 2019.
ISSN: ISSN 1097-4172
PubMed: 31835031
DOI: 10.1016/J.CELL.2019.11.023
Page generated: Tue Oct 1 17:00:34 2024

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