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Magnesium in PDB 6riq: Mincd Filament From Pseudomonas Aeruginosa

Magnesium Binding Sites:

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>>> Page 1 <<< Page 2, Binding sites: 11 - 11;

Binding sites:

The binding sites of Magnesium atom in the Mincd Filament From Pseudomonas Aeruginosa (pdb code 6riq). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 11 binding sites of Magnesium where determined in the Mincd Filament From Pseudomonas Aeruginosa, PDB code: 6riq:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 11 in 6riq

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Magnesium binding site 1 out of 11 in the Mincd Filament From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Mincd Filament From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg301

b:17.1
occ:1.00
OG1 C:THR17 2.0 38.3 1.0
O1B C:ATP302 2.1 28.2 1.0
O1G C:ATP302 2.3 48.6 1.0
PB C:ATP302 3.4 13.9 1.0
CB C:THR17 3.4 26.7 1.0
PG C:ATP302 3.5 18.8 1.0
N C:THR17 3.5 20.4 1.0
OD1 C:ASP119 3.6 78.8 1.0
OD2 C:ASP119 3.8 69.3 1.0
O2G C:ATP302 3.8 19.8 1.0
O3B C:ATP302 3.8 16.6 1.0
CA C:THR17 4.0 13.2 1.0
CG C:ASP119 4.1 76.5 1.0
O1A C:ATP302 4.2 26.3 1.0
O2B C:ATP302 4.2 44.3 1.0
CB C:LYS16 4.3 6.6 1.0
ND2 C:ASN45 4.3 45.9 1.0
CG2 C:THR17 4.3 29.9 1.0
O C:SER120 4.3 41.6 1.0
C C:LYS16 4.5 16.3 1.0
CE C:LYS16 4.5 23.2 1.0
O3A C:ATP302 4.6 8.0 1.0
O3G C:ATP302 4.8 22.7 1.0
CA C:LYS16 4.8 6.1 1.0
OD2 C:ASP40 4.8 83.5 1.0
PA C:ATP302 4.9 18.6 1.0
N C:LYS16 4.9 22.2 1.0
CB C:ASN45 5.0 35.2 1.0

Magnesium binding site 2 out of 11 in 6riq

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Magnesium binding site 2 out of 11 in the Mincd Filament From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Mincd Filament From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg301

b:25.2
occ:1.00
OG1 D:THR17 2.1 36.1 1.0
O1G D:ATP302 2.3 61.0 1.0
O1B D:ATP302 2.5 22.3 1.0
CB D:THR17 3.5 19.0 1.0
PG D:ATP302 3.5 21.1 1.0
OD1 D:ASP119 3.6 74.0 1.0
PB D:ATP302 3.7 11.8 1.0
N D:THR17 3.8 13.2 1.0
O2G D:ATP302 3.8 23.8 1.0
OD2 D:ASP119 3.8 67.2 1.0
O3B D:ATP302 4.0 7.8 1.0
CA D:THR17 4.1 11.1 1.0
CG D:ASP119 4.2 69.1 1.0
O D:SER120 4.3 48.5 1.0
OD2 D:ASP40 4.3 52.9 1.0
CG2 D:THR17 4.4 26.5 1.0
CB D:LYS16 4.5 6.5 1.0
O2B D:ATP302 4.5 61.5 1.0
O1A D:ATP302 4.5 33.8 1.0
ND2 D:ASN45 4.5 48.2 1.0
CE D:LYS16 4.6 16.2 1.0
C D:LYS16 4.7 11.7 1.0
O3G D:ATP302 4.8 37.2 1.0
O3A D:ATP302 4.9 15.4 1.0
CB D:ASN45 4.9 34.2 1.0

Magnesium binding site 3 out of 11 in 6riq

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Magnesium binding site 3 out of 11 in the Mincd Filament From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Mincd Filament From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg301

b:17.1
occ:1.00
OG1 G:THR17 2.0 38.3 1.0
O1B G:ATP302 2.1 28.2 1.0
O1G G:ATP302 2.3 48.6 1.0
PB G:ATP302 3.4 13.9 1.0
CB G:THR17 3.4 26.7 1.0
PG G:ATP302 3.4 18.8 1.0
N G:THR17 3.5 20.4 1.0
OD1 G:ASP119 3.6 78.8 1.0
OD2 G:ASP119 3.8 69.3 1.0
O2G G:ATP302 3.8 19.8 1.0
O3B G:ATP302 3.8 16.6 1.0
CA G:THR17 4.0 13.2 1.0
CG G:ASP119 4.1 76.5 1.0
O1A G:ATP302 4.2 26.3 1.0
O2B G:ATP302 4.2 44.3 1.0
CB G:LYS16 4.3 6.6 1.0
ND2 G:ASN45 4.3 45.9 1.0
CG2 G:THR17 4.3 29.9 1.0
O G:SER120 4.3 41.6 1.0
C G:LYS16 4.5 16.3 1.0
CE G:LYS16 4.5 23.2 1.0
O3A G:ATP302 4.6 8.0 1.0
O3G G:ATP302 4.8 22.7 1.0
CA G:LYS16 4.8 6.1 1.0
OD2 G:ASP40 4.8 83.5 1.0
PA G:ATP302 4.9 18.6 1.0
N G:LYS16 4.9 22.2 1.0
CB G:ASN45 5.0 35.2 1.0

Magnesium binding site 4 out of 11 in 6riq

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Magnesium binding site 4 out of 11 in the Mincd Filament From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Mincd Filament From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Mg301

b:17.1
occ:1.00
OG1 J:THR17 2.0 38.3 1.0
O1B J:ATP302 2.1 28.2 1.0
O1G J:ATP302 2.3 48.6 1.0
PB J:ATP302 3.4 13.9 1.0
CB J:THR17 3.4 26.7 1.0
PG J:ATP302 3.4 18.8 1.0
N J:THR17 3.5 20.4 1.0
OD1 J:ASP119 3.6 78.8 1.0
OD2 J:ASP119 3.8 69.3 1.0
O2G J:ATP302 3.8 19.8 1.0
O3B J:ATP302 3.8 16.6 1.0
CA J:THR17 4.0 13.2 1.0
CG J:ASP119 4.1 76.5 1.0
O1A J:ATP302 4.2 26.3 1.0
O2B J:ATP302 4.2 44.3 1.0
CB J:LYS16 4.3 6.6 1.0
ND2 J:ASN45 4.3 45.9 1.0
CG2 J:THR17 4.3 29.9 1.0
O J:SER120 4.3 41.6 1.0
C J:LYS16 4.5 16.3 1.0
CE J:LYS16 4.5 23.2 1.0
O3A J:ATP302 4.6 8.0 1.0
O3G J:ATP302 4.8 22.7 1.0
CA J:LYS16 4.8 6.1 1.0
OD2 J:ASP40 4.8 83.5 1.0
PA J:ATP302 4.9 18.6 1.0
N J:LYS16 4.9 22.2 1.0
CB J:ASN45 5.0 35.2 1.0

Magnesium binding site 5 out of 11 in 6riq

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Magnesium binding site 5 out of 11 in the Mincd Filament From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Mincd Filament From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Mg301

b:25.2
occ:1.00
OG1 K:THR17 2.1 36.1 1.0
O1G K:ATP302 2.3 61.0 1.0
O1B K:ATP302 2.5 22.3 1.0
CB K:THR17 3.5 19.0 1.0
PG K:ATP302 3.5 21.1 1.0
OD1 K:ASP119 3.6 74.0 1.0
PB K:ATP302 3.7 11.8 1.0
N K:THR17 3.8 13.2 1.0
O2G K:ATP302 3.8 23.8 1.0
OD2 K:ASP119 3.8 67.2 1.0
O3B K:ATP302 4.0 7.8 1.0
CA K:THR17 4.1 11.1 1.0
CG K:ASP119 4.2 69.1 1.0
O K:SER120 4.3 48.5 1.0
OD2 K:ASP40 4.3 52.9 1.0
CG2 K:THR17 4.4 26.5 1.0
CB K:LYS16 4.5 6.5 1.0
O2B K:ATP302 4.5 61.5 1.0
O1A K:ATP302 4.5 33.8 1.0
ND2 K:ASN45 4.5 48.2 1.0
CE K:LYS16 4.6 16.2 1.0
C K:LYS16 4.7 11.7 1.0
O3G K:ATP302 4.8 37.2 1.0
O3A K:ATP302 4.9 15.4 1.0
CB K:ASN45 4.9 34.2 1.0

Magnesium binding site 6 out of 11 in 6riq

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Magnesium binding site 6 out of 11 in the Mincd Filament From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Mincd Filament From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Mg301

b:17.1
occ:1.00
OG1 M:THR17 2.0 38.3 1.0
O1B M:ATP302 2.1 28.2 1.0
O1G M:ATP302 2.3 48.6 1.0
PB M:ATP302 3.4 13.9 1.0
CB M:THR17 3.4 26.7 1.0
PG M:ATP302 3.4 18.8 1.0
N M:THR17 3.5 20.4 1.0
OD1 M:ASP119 3.6 78.8 1.0
OD2 M:ASP119 3.8 69.3 1.0
O2G M:ATP302 3.8 19.8 1.0
O3B M:ATP302 3.8 16.6 1.0
CA M:THR17 4.0 13.2 1.0
CG M:ASP119 4.1 76.5 1.0
O1A M:ATP302 4.2 26.3 1.0
O2B M:ATP302 4.2 44.3 1.0
CB M:LYS16 4.3 6.6 1.0
ND2 M:ASN45 4.3 45.9 1.0
CG2 M:THR17 4.3 29.9 1.0
O M:SER120 4.3 41.6 1.0
C M:LYS16 4.5 16.3 1.0
CE M:LYS16 4.5 23.2 1.0
O3A M:ATP302 4.6 8.0 1.0
O3G M:ATP302 4.8 22.7 1.0
CA M:LYS16 4.8 6.1 1.0
OD2 M:ASP40 4.8 83.5 1.0
PA M:ATP302 4.9 18.6 1.0
N M:LYS16 4.9 22.2 1.0
CB M:ASN45 5.0 35.2 1.0

Magnesium binding site 7 out of 11 in 6riq

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Magnesium binding site 7 out of 11 in the Mincd Filament From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Mincd Filament From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
N:Mg301

b:25.2
occ:1.00
OG1 N:THR17 2.1 36.1 1.0
O1G N:ATP302 2.3 61.0 1.0
O1B N:ATP302 2.5 22.3 1.0
CB N:THR17 3.5 19.0 1.0
PG N:ATP302 3.5 21.1 1.0
OD1 N:ASP119 3.6 74.0 1.0
PB N:ATP302 3.7 11.8 1.0
N N:THR17 3.8 13.2 1.0
O2G N:ATP302 3.8 23.8 1.0
OD2 N:ASP119 3.8 67.2 1.0
O3B N:ATP302 4.0 7.8 1.0
CA N:THR17 4.1 11.1 1.0
CG N:ASP119 4.2 69.1 1.0
O N:SER120 4.3 48.5 1.0
OD2 N:ASP40 4.3 52.9 1.0
CG2 N:THR17 4.4 26.5 1.0
CB N:LYS16 4.5 6.5 1.0
O2B N:ATP302 4.5 61.5 1.0
O1A N:ATP302 4.5 33.8 1.0
ND2 N:ASN45 4.5 48.2 1.0
CE N:LYS16 4.6 16.2 1.0
C N:LYS16 4.7 11.7 1.0
O3G N:ATP302 4.8 37.2 1.0
O3A N:ATP302 4.9 15.4 1.0
CB N:ASN45 4.9 34.2 1.0

Magnesium binding site 8 out of 11 in 6riq

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Magnesium binding site 8 out of 11 in the Mincd Filament From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Mincd Filament From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
Q:Mg301

b:17.1
occ:1.00
OG1 Q:THR17 2.0 38.3 1.0
O1B Q:ATP302 2.1 28.2 1.0
O1G Q:ATP302 2.3 48.6 1.0
PB Q:ATP302 3.4 13.9 1.0
CB Q:THR17 3.4 26.7 1.0
PG Q:ATP302 3.5 18.8 1.0
N Q:THR17 3.5 20.4 1.0
OD1 Q:ASP119 3.6 78.8 1.0
OD2 Q:ASP119 3.8 69.3 1.0
O2G Q:ATP302 3.8 19.8 1.0
O3B Q:ATP302 3.8 16.6 1.0
CA Q:THR17 4.0 13.2 1.0
CG Q:ASP119 4.1 76.5 1.0
O1A Q:ATP302 4.2 26.3 1.0
O2B Q:ATP302 4.2 44.3 1.0
CB Q:LYS16 4.3 6.6 1.0
ND2 Q:ASN45 4.3 45.9 1.0
CG2 Q:THR17 4.3 29.9 1.0
O Q:SER120 4.3 41.6 1.0
C Q:LYS16 4.5 16.3 1.0
CE Q:LYS16 4.5 23.2 1.0
O3A Q:ATP302 4.6 8.0 1.0
O3G Q:ATP302 4.8 22.7 1.0
CA Q:LYS16 4.8 6.1 1.0
OD2 Q:ASP40 4.8 83.5 1.0
PA Q:ATP302 4.9 18.6 1.0
N Q:LYS16 4.9 22.2 1.0
CB Q:ASN45 5.0 35.2 1.0

Magnesium binding site 9 out of 11 in 6riq

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Magnesium binding site 9 out of 11 in the Mincd Filament From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Mincd Filament From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
R:Mg301

b:25.2
occ:1.00
OG1 R:THR17 2.1 36.1 1.0
O1G R:ATP302 2.3 61.0 1.0
O1B R:ATP302 2.5 22.3 1.0
CB R:THR17 3.5 19.0 1.0
PG R:ATP302 3.5 21.1 1.0
OD1 R:ASP119 3.6 74.0 1.0
PB R:ATP302 3.7 11.8 1.0
N R:THR17 3.8 13.2 1.0
O2G R:ATP302 3.8 23.8 1.0
OD2 R:ASP119 3.8 67.2 1.0
O3B R:ATP302 4.0 7.8 1.0
CA R:THR17 4.1 11.1 1.0
CG R:ASP119 4.2 69.1 1.0
O R:SER120 4.3 48.5 1.0
OD2 R:ASP40 4.3 52.9 1.0
CG2 R:THR17 4.4 26.5 1.0
CB R:LYS16 4.5 6.5 1.0
O2B R:ATP302 4.5 61.5 1.0
O1A R:ATP302 4.5 33.8 1.0
ND2 R:ASN45 4.5 48.2 1.0
CE R:LYS16 4.6 16.2 1.0
C R:LYS16 4.7 11.7 1.0
O3G R:ATP302 4.8 37.2 1.0
O3A R:ATP302 4.9 15.4 1.0
CB R:ASN45 4.9 34.2 1.0

Magnesium binding site 10 out of 11 in 6riq

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Magnesium binding site 10 out of 11 in the Mincd Filament From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Mincd Filament From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
U:Mg301

b:17.1
occ:1.00
OG1 U:THR17 2.0 38.3 1.0
O1B U:ATP302 2.1 28.2 1.0
O1G U:ATP302 2.3 48.6 1.0
PB U:ATP302 3.4 13.9 1.0
CB U:THR17 3.4 26.7 1.0
PG U:ATP302 3.4 18.8 1.0
N U:THR17 3.5 20.4 1.0
OD1 U:ASP119 3.6 78.8 1.0
OD2 U:ASP119 3.8 69.3 1.0
O2G U:ATP302 3.8 19.8 1.0
O3B U:ATP302 3.8 16.6 1.0
CA U:THR17 4.0 13.2 1.0
CG U:ASP119 4.1 76.5 1.0
O1A U:ATP302 4.2 26.3 1.0
O2B U:ATP302 4.2 44.3 1.0
CB U:LYS16 4.3 6.6 1.0
ND2 U:ASN45 4.3 45.9 1.0
CG2 U:THR17 4.3 29.9 1.0
O U:SER120 4.3 41.6 1.0
C U:LYS16 4.5 16.3 1.0
CE U:LYS16 4.5 23.2 1.0
O3A U:ATP302 4.6 8.0 1.0
O3G U:ATP302 4.8 22.7 1.0
CA U:LYS16 4.8 6.1 1.0
OD2 U:ASP40 4.8 83.5 1.0
PA U:ATP302 4.9 18.6 1.0
N U:LYS16 4.9 22.2 1.0
CB U:ASN45 5.0 35.2 1.0

Reference:

A.Szewczak-Harris, J.Wagstaff, J.Lowe. Cryo-Em Structure of the Mincd Copolymeric Filament From Pseudomonas Aeruginosa at 3.1 Angstrom Resolution. Febs Lett. V. 593 1915 2019.
ISSN: ISSN 0014-5793
PubMed: 31166018
DOI: 10.1002/1873-3468.13471
Page generated: Tue Oct 1 17:01:00 2024

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