Atomistry » Magnesium » PDB 6tfw-6tse » 6tps
Atomistry »
  Magnesium »
    PDB 6tfw-6tse »
      6tps »

Magnesium in PDB 6tps: Early Intermediate Rna Polymerase I Pre-Initiation Complex - Eipic

Enzymatic activity of Early Intermediate Rna Polymerase I Pre-Initiation Complex - Eipic

All present enzymatic activity of Early Intermediate Rna Polymerase I Pre-Initiation Complex - Eipic:
2.7.7.6;

Other elements in 6tps:

The structure of Early Intermediate Rna Polymerase I Pre-Initiation Complex - Eipic also contains other interesting chemical elements:

Zinc (Zn) 7 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Early Intermediate Rna Polymerase I Pre-Initiation Complex - Eipic (pdb code 6tps). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Early Intermediate Rna Polymerase I Pre-Initiation Complex - Eipic, PDB code: 6tps:

Magnesium binding site 1 out of 1 in 6tps

Go back to Magnesium Binding Sites List in 6tps
Magnesium binding site 1 out of 1 in the Early Intermediate Rna Polymerase I Pre-Initiation Complex - Eipic


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Early Intermediate Rna Polymerase I Pre-Initiation Complex - Eipic within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1703

b:42.5
occ:1.00
OD1 A:ASP627 2.1 61.6 1.0
OD2 A:ASP631 2.2 61.6 1.0
OD2 A:ASP627 2.4 61.6 1.0
CG A:ASP627 2.4 61.6 1.0
OD1 A:ASP629 3.0 61.6 1.0
CG A:ASP631 3.2 61.6 1.0
OD1 A:ASP631 3.5 61.6 1.0
O A:ASP627 3.6 61.6 1.0
CB A:ASP627 3.8 61.6 1.0
O A:ASP629 3.9 61.6 1.0
CG A:ASP629 3.9 61.6 1.0
C A:ASP627 4.3 61.6 1.0
OD2 A:ASP629 4.4 61.6 1.0
CA A:ASP627 4.4 61.6 1.0
N A:ASP627 4.5 61.6 1.0
CB A:ASP631 4.5 61.6 1.0
C A:ASP629 4.6 61.6 1.0
N A:ASP629 4.6 61.6 1.0
NH2 A:ARG591 4.8 61.6 1.0
N A:ASP631 4.9 61.6 1.0

Reference:

M.Pilsl, C.Engel. Structural Basis of Rna Polymerase I Pre-Initiation Complex Formation and Promoter Melting. Nat Commun V. 11 1206 2020.
ISSN: ESSN 2041-1723
PubMed: 32139698
DOI: 10.1038/S41467-020-15052-Y
Page generated: Tue Oct 1 19:04:11 2024

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy