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Magnesium in PDB 6v22: Cryo-Em Structure of CA2+-Bound HSSLO1-BETA4 Channel Complex

Other elements in 6v22:

The structure of Cryo-Em Structure of CA2+-Bound HSSLO1-BETA4 Channel Complex also contains other interesting chemical elements:

Potassium (K) 4 atoms
Calcium (Ca) 8 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryo-Em Structure of CA2+-Bound HSSLO1-BETA4 Channel Complex (pdb code 6v22). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Cryo-Em Structure of CA2+-Bound HSSLO1-BETA4 Channel Complex, PDB code: 6v22:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in 6v22

Go back to Magnesium Binding Sites List in 6v22
Magnesium binding site 1 out of 4 in the Cryo-Em Structure of CA2+-Bound HSSLO1-BETA4 Channel Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of CA2+-Bound HSSLO1-BETA4 Channel Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1101

b:62.1
occ:1.00
OE2 A:GLU399 2.3 62.0 1.0
OE2 A:GLU374 3.2 69.2 1.0
CD A:GLU399 3.3 62.0 1.0
OE1 A:GLU374 3.5 69.2 1.0
CD A:GLU374 3.5 69.2 1.0
CG A:GLU399 3.8 62.0 1.0
O A:THR396 3.9 66.6 1.0
OE1 A:GLU399 4.5 62.0 1.0
CG A:GLU374 4.6 69.2 1.0
C A:THR396 4.7 66.6 1.0
OD1 D:ASN172 4.8 83.0 1.0

Magnesium binding site 2 out of 4 in 6v22

Go back to Magnesium Binding Sites List in 6v22
Magnesium binding site 2 out of 4 in the Cryo-Em Structure of CA2+-Bound HSSLO1-BETA4 Channel Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryo-Em Structure of CA2+-Bound HSSLO1-BETA4 Channel Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1106

b:58.8
occ:1.00
OE2 B:GLU399 2.3 61.7 1.0
OE2 B:GLU374 3.2 69.1 1.0
CD B:GLU399 3.3 61.7 1.0
OE1 B:GLU374 3.5 69.1 1.0
CD B:GLU374 3.5 69.1 1.0
CG B:GLU399 3.8 61.7 1.0
O B:THR396 3.9 66.5 1.0
OE1 B:GLU399 4.5 61.7 1.0
CG B:GLU374 4.6 69.1 1.0
C B:THR396 4.7 66.5 1.0
OD1 A:ASN172 4.8 84.7 1.0

Magnesium binding site 3 out of 4 in 6v22

Go back to Magnesium Binding Sites List in 6v22
Magnesium binding site 3 out of 4 in the Cryo-Em Structure of CA2+-Bound HSSLO1-BETA4 Channel Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Cryo-Em Structure of CA2+-Bound HSSLO1-BETA4 Channel Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg1106

b:63.0
occ:1.00
OE2 C:GLU399 2.3 61.9 1.0
OE2 C:GLU374 3.2 68.8 1.0
CD C:GLU399 3.3 61.9 1.0
OE1 C:GLU374 3.5 68.8 1.0
CD C:GLU374 3.5 68.8 1.0
CG C:GLU399 3.8 61.9 1.0
O C:THR396 3.9 66.2 1.0
OE1 C:GLU399 4.5 61.9 1.0
CG C:GLU374 4.6 68.8 1.0
C C:THR396 4.7 66.2 1.0
OD1 B:ASN172 4.8 83.0 1.0

Magnesium binding site 4 out of 4 in 6v22

Go back to Magnesium Binding Sites List in 6v22
Magnesium binding site 4 out of 4 in the Cryo-Em Structure of CA2+-Bound HSSLO1-BETA4 Channel Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Cryo-Em Structure of CA2+-Bound HSSLO1-BETA4 Channel Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg1106

b:59.1
occ:1.00
OE2 D:GLU399 2.3 61.8 1.0
OE2 D:GLU374 3.2 68.9 1.0
CD D:GLU399 3.3 61.8 1.0
OE1 D:GLU374 3.5 68.9 1.0
CD D:GLU374 3.5 68.9 1.0
CG D:GLU399 3.8 61.8 1.0
O D:THR396 3.9 66.1 1.0
OE1 D:GLU399 4.5 61.8 1.0
CG D:GLU374 4.6 68.9 1.0
C D:THR396 4.7 66.1 1.0
OD1 C:ASN172 4.8 84.7 1.0

Reference:

X.Tao, R.Mackinnon. Molecular Structures of the Human SLO1 K+Channel in Complex with Beta 4. Elife V. 8 2019.
ISSN: ESSN 2050-084X
PubMed: 31815672
DOI: 10.7554/ELIFE.51409
Page generated: Tue Oct 1 21:22:04 2024

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