Magnesium in PDB 6w04: Crystal Structure of Had Hydrolase, Family Ia, Variant 3 From Entamoeba Histolytica Hm-1:Imss

The structure of Crystal Structure of Had Hydrolase, Family Ia, Variant 3 From Entamoeba Histolytica Hm-1:Imss, PDB code: 6w04 was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.03 / 1.95
Space group	P 63
Cell size a, b, c (Å), α, β, γ (°)	100.910, 100.910, 45.240, 90.00, 90.00, 120.00
R / Rfree (%)	15.8 / 21.1

The binding sites of Magnesium atom in the Crystal Structure of Had Hydrolase, Family Ia, Variant 3 From Entamoeba Histolytica Hm-1:Imss (pdb code 6w04). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Had Hydrolase, Family Ia, Variant 3 From Entamoeba Histolytica Hm-1:Imss, PDB code: 6w04:

Magnesium binding site 1 out of 1 in the Crystal Structure of Had Hydrolase, Family Ia, Variant 3 From Entamoeba Histolytica Hm-1:Imss


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Had Hydrolase, Family Ia, Variant 3 From Entamoeba Histolytica Hm-1:Imss within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg301 b:28.6 occ:1.00 O1 A:EDO302 2.0 34.6 1.0 OD2 A:ASP7 2.1 34.2 1.0 OD2 A:ASP169 2.1 33.4 1.0 O A:ASN9 2.1 29.9 1.0 O A:HOH420 2.1 29.3 1.0 O A:HOH429 2.2 30.5 1.0 C1 A:EDO302 3.1 53.6 1.0 CG A:ASP7 3.1 35.7 1.0 CG A:ASP169 3.1 29.6 1.0 C A:ASN9 3.3 28.7 1.0 OD1 A:ASP169 3.5 31.3 1.0 OD1 A:ASP7 3.5 31.6 1.0 O2 A:EDO302 3.8 51.0 1.0 OE1 A:GLU168 4.0 34.0 1.0 OG1 A:THR11 4.1 29.7 1.0 C2 A:EDO302 4.1 50.5 1.0 CA A:ASN9 4.2 27.5 1.0 O A:HOH434 4.2 32.3 1.0 N A:GLY10 4.3 31.2 1.0 CG2 A:THR170 4.3 32.4 1.0 N A:ASN9 4.3 29.6 1.0 CB A:ASN9 4.4 29.1 1.0 CA A:GLY10 4.4 30.9 1.0 CB A:ASP7 4.4 24.9 1.0 CB A:ASP169 4.5 26.1 1.0 O2 A:SO4303 4.6 69.1 0.8 N A:ASP169 4.7 30.2 1.0 N A:THR11 4.7 34.0 1.0 C A:GLY10 4.7 35.6 1.0 NZ A:LYS144 4.7 50.1 1.0 OG1 A:THR170 4.9 32.8 1.0 CD A:GLU168 4.9 39.2 1.0 C A:PHE8 4.9 29.8 1.0 CB A:THR11 4.9 31.3 1.0

J.Abendroth, P.S.Horanyi, D.D.Lorimer, T.E.Edwards. Crystal Structure of Had Hydrolase, Family Ia, Variant 3 From Entamoeba Histolytica Hm-1:Imss To Be Published.