Atomistry » Magnesium » PDB 6yxu-6z9h » 6z3r
Atomistry »
  Magnesium »
    PDB 6yxu-6z9h »
      6z3r »

Magnesium in PDB 6z3r: Structure of SMG1-8-9 Kinase Complex Bound to UPF1-Lsq

Enzymatic activity of Structure of SMG1-8-9 Kinase Complex Bound to UPF1-Lsq

All present enzymatic activity of Structure of SMG1-8-9 Kinase Complex Bound to UPF1-Lsq:
2.7.11.1;

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of SMG1-8-9 Kinase Complex Bound to UPF1-Lsq (pdb code 6z3r). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of SMG1-8-9 Kinase Complex Bound to UPF1-Lsq, PDB code: 6z3r:

Magnesium binding site 1 out of 1 in 6z3r

Go back to Magnesium Binding Sites List in 6z3r
Magnesium binding site 1 out of 1 in the Structure of SMG1-8-9 Kinase Complex Bound to UPF1-Lsq


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of SMG1-8-9 Kinase Complex Bound to UPF1-Lsq within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg602

b:39.5
occ:1.00
OG C:SER218 1.9 39.6 1.0
OG1 C:THR253 2.1 45.3 1.0
O3B C:ATP601 2.4 46.0 1.0
O1G C:ATP601 2.7 46.0 1.0
HB C:THR253 3.0 45.3 1.0
CB C:THR253 3.1 45.3 1.0
PG C:ATP601 3.2 46.0 1.0
CB C:SER218 3.2 39.6 1.0
O3A C:ATP601 3.3 46.0 1.0
HB2 C:SER218 3.3 39.6 1.0
H C:SER218 3.3 39.6 1.0
PB C:ATP601 3.5 46.0 1.0
HG21 C:THR253 3.5 45.3 1.0
HB3 C:SER218 3.7 39.6 1.0
CG2 C:THR253 3.9 45.3 1.0
N C:SER218 4.0 39.6 1.0
HB2 C:LYS217 4.1 39.2 1.0
O3G C:ATP601 4.2 46.0 1.0
HE2 C:LYS217 4.2 39.2 1.0
HG23 C:THR253 4.2 45.3 1.0
O2G C:ATP601 4.2 46.0 1.0
CA C:SER218 4.2 39.6 1.0
H C:THR253 4.2 45.3 1.0
O1A C:ATP601 4.3 46.0 1.0
O2B C:ATP601 4.3 46.0 1.0
O C:ARG239 4.3 44.9 1.0
CA C:THR253 4.3 45.3 1.0
OD2 C:ASP269 4.4 41.2 1.0
N C:THR253 4.4 45.3 1.0
PA C:ATP601 4.4 46.0 1.0
O1B C:ATP601 4.5 46.0 1.0
HA C:ALA240 4.5 47.1 1.0
HA C:SER218 4.5 39.6 1.0
HZ3 C:LYS217 4.6 39.2 1.0
HG22 C:THR253 4.7 45.3 1.0
HA C:THR253 4.7 45.3 1.0
O C:THR270 4.8 42.7 1.0
HB3 C:GLN252 4.8 48.1 1.0
OD1 C:ASP269 4.9 41.2 1.0
CG C:ASP269 5.0 41.2 1.0

Reference:

L.M.Langer, Y.Gat, F.Bonneau, E.Conti. Structure of Substrate-Bound SMG1-8-9 Kinase Complex Reveals Molecular Basis For Phosphorylation Specificity. Elife V. 9 2020.
ISSN: ESSN 2050-084X
PubMed: 32469312
DOI: 10.7554/ELIFE.57127
Page generated: Wed Oct 2 02:03:53 2024

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy