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Magnesium in PDB 6zia: Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure

Protein crystallography data

The structure of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure, PDB code: 6zia was solved by P.Baath, R.Dods, G.Braenden, R.Neutze, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.31 / 2.80
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 226.500, 226.500, 113.900, 90.00, 90.00, 90.00
R / Rfree (%) 16 / 15.4

Other elements in 6zia:

The structure of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure also contains other interesting chemical elements:

Iron (Fe) 6 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure (pdb code 6zia). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 7 binding sites of Magnesium where determined in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure, PDB code: 6zia:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7;

Magnesium binding site 1 out of 7 in 6zia

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Magnesium binding site 1 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg301

b:65.9
occ:0.70
MG L:BCB301 0.0 65.9 0.7
MG L:BCB301 0.2 65.9 0.3
NA L:BCB301 1.9 61.9 0.3
ND L:BCB301 2.0 60.2 0.3
NA L:BCB301 2.0 61.9 0.7
ND L:BCB301 2.0 60.2 0.7
NB L:BCB301 2.0 63.4 0.7
NC L:BCB301 2.1 63.5 0.7
NB L:BCB301 2.1 63.4 0.3
NE2 L:HIS173 2.1 66.3 0.7
NC L:BCB301 2.2 63.5 0.3
NE2 L:HIS173 2.5 66.3 0.3
C1A L:BCB301 2.9 61.9 0.3
C4A L:BCB301 2.9 62.4 0.3
C4D L:BCB301 2.9 60.1 0.3
C4D L:BCB301 3.0 60.1 0.7
C1A L:BCB301 3.0 61.9 0.7
C4A L:BCB301 3.0 62.4 0.7
C1B L:BCB301 3.1 63.1 0.7
C1B L:BCB301 3.1 63.1 0.3
C4B L:BCB301 3.1 60.5 0.7
CE1 L:HIS173 3.1 66.2 0.7
C1D L:BCB301 3.1 64.2 0.7
C4C L:BCB301 3.1 62.4 0.7
C1D L:BCB301 3.1 64.2 0.3
C1C L:BCB301 3.1 63.2 0.7
CD2 L:HIS173 3.1 64.5 0.7
C4B L:BCB301 3.2 60.5 0.3
C4C L:BCB301 3.2 62.4 0.3
C1C L:BCB301 3.3 63.2 0.3
CHA L:BCB301 3.3 62.6 0.3
CHB L:BCB301 3.3 63.1 0.3
CD2 L:HIS173 3.4 64.5 0.3
CHB L:BCB301 3.4 63.1 0.7
CBB M:BCB403 3.4 63.9 0.7
CHA L:BCB301 3.4 62.6 0.7
CHC L:BCB301 3.5 59.2 0.7
CBB M:BCB403 3.5 63.9 0.3
CE1 L:HIS173 3.5 66.2 0.3
CAB M:BCB403 3.6 61.1 0.3
CHD L:BCB301 3.6 62.0 0.7
CHC L:BCB301 3.6 59.2 0.3
CAB M:BCB403 3.6 61.1 0.7
OBB M:BCB403 3.6 64.3 0.3
CHD L:BCB301 3.6 62.0 0.3
OBB M:BCB403 3.9 64.3 0.7
C2A L:BCB301 4.2 61.9 0.3
C3A L:BCB301 4.2 61.4 0.3
ND1 L:HIS173 4.2 63.2 0.7
C3D L:BCB301 4.2 62.5 0.3
CD1 L:TRP167 4.2 64.8 0.3
C3D L:BCB301 4.3 62.5 0.7
CG L:HIS173 4.3 66.3 0.7
NE1 L:TRP167 4.3 64.9 0.3
C3B M:BCB403 4.3 62.0 0.7
C2D L:BCB301 4.3 62.6 0.3
CD1 L:TRP167 4.3 64.8 0.7
C3A L:BCB301 4.3 61.4 0.7
C2D L:BCB301 4.3 62.6 0.7
C2A L:BCB301 4.3 61.9 0.7
NE1 L:TRP167 4.4 64.9 0.7
C3C L:BCB301 4.4 60.8 0.7
C3B L:BCB301 4.4 62.0 0.7
C2B L:BCB301 4.4 62.9 0.7
C3B M:BCB403 4.4 62.0 0.3
C2B L:BCB301 4.4 62.9 0.3
C3C L:BCB301 4.5 60.8 0.3
C3B L:BCB301 4.5 62.0 0.3
C2C L:BCB301 4.5 64.8 0.7
CG L:HIS173 4.6 66.3 0.3
ND1 L:HIS173 4.6 63.2 0.3
C2C L:BCB301 4.6 64.8 0.3
CBD L:BCB301 4.7 63.2 0.3
CBD L:BCB301 4.9 63.2 0.7

Magnesium binding site 2 out of 7 in 6zia

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Magnesium binding site 2 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg301

b:65.9
occ:0.30
MG L:BCB301 0.0 65.9 0.3
MG L:BCB301 0.2 65.9 0.7
NC L:BCB301 1.9 63.5 0.7
NB L:BCB301 2.0 63.4 0.7
NA L:BCB301 2.0 61.9 0.3
ND L:BCB301 2.0 60.2 0.3
NB L:BCB301 2.0 63.4 0.3
NC L:BCB301 2.1 63.5 0.3
ND L:BCB301 2.1 60.2 0.7
NA L:BCB301 2.1 61.9 0.7
NE2 L:HIS173 2.2 66.3 0.7
NE2 L:HIS173 2.6 66.3 0.3
C4B L:BCB301 3.0 60.5 0.7
C4A L:BCB301 3.0 62.4 0.3
C1C L:BCB301 3.0 63.2 0.7
C1A L:BCB301 3.0 61.9 0.3
C4D L:BCB301 3.0 60.1 0.3
C4C L:BCB301 3.0 62.4 0.7
C1B L:BCB301 3.0 63.1 0.7
C1B L:BCB301 3.0 63.1 0.3
C4A L:BCB301 3.1 62.4 0.7
C4D L:BCB301 3.1 60.1 0.7
C4B L:BCB301 3.1 60.5 0.3
C1D L:BCB301 3.1 64.2 0.7
C4C L:BCB301 3.1 62.4 0.3
C1C L:BCB301 3.1 63.2 0.3
C1D L:BCB301 3.1 64.2 0.3
C1A L:BCB301 3.1 61.9 0.7
CE1 L:HIS173 3.2 66.2 0.7
CD2 L:HIS173 3.3 64.5 0.7
CBB M:BCB403 3.3 63.9 0.7
CHC L:BCB301 3.3 59.2 0.7
CHB L:BCB301 3.4 63.1 0.3
CHA L:BCB301 3.4 62.6 0.3
CBB M:BCB403 3.4 63.9 0.3
CHB L:BCB301 3.4 63.1 0.7
CAB M:BCB403 3.4 61.1 0.3
OBB M:BCB403 3.4 64.3 0.3
CHC L:BCB301 3.5 59.2 0.3
CAB M:BCB403 3.5 61.1 0.7
CD2 L:HIS173 3.5 64.5 0.3
CHD L:BCB301 3.5 62.0 0.7
CHA L:BCB301 3.5 62.6 0.7
CHD L:BCB301 3.6 62.0 0.3
CE1 L:HIS173 3.6 66.2 0.3
OBB M:BCB403 3.7 64.3 0.7
C3B M:BCB403 4.2 62.0 0.7
C3C L:BCB301 4.2 60.8 0.7
C3B M:BCB403 4.3 62.0 0.3
CD1 L:TRP167 4.3 64.8 0.3
C3D L:BCB301 4.3 62.5 0.3
C3B L:BCB301 4.3 62.0 0.7
ND1 L:HIS173 4.3 63.2 0.7
C3A L:BCB301 4.3 61.4 0.3
C2A L:BCB301 4.3 61.9 0.3
C3C L:BCB301 4.3 60.8 0.3
C2D L:BCB301 4.3 62.6 0.3
C2B L:BCB301 4.4 62.9 0.7
C3D L:BCB301 4.4 62.5 0.7
C2D L:BCB301 4.4 62.6 0.7
CD1 L:TRP167 4.4 64.8 0.7
NE1 L:TRP167 4.4 64.9 0.3
C2C L:BCB301 4.4 64.8 0.7
C2B L:BCB301 4.4 62.9 0.3
C3B L:BCB301 4.4 62.0 0.3
CG L:HIS173 4.4 66.3 0.7
C3A L:BCB301 4.4 61.4 0.7
NE1 L:TRP167 4.4 64.9 0.7
C2A L:BCB301 4.5 61.9 0.7
C2C L:BCB301 4.5 64.8 0.3
CG L:HIS173 4.7 66.3 0.3
ND1 L:HIS173 4.7 63.2 0.3
CBD L:BCB301 4.9 63.2 0.3
C2B M:BCB403 4.9 60.5 0.7
C4B M:BCB403 5.0 59.0 0.7
C2B M:BCB403 5.0 60.5 0.3
CBD L:BCB301 5.0 63.2 0.7

Magnesium binding site 3 out of 7 in 6zia

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Magnesium binding site 3 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure


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Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg302

b:67.0
occ:0.70
MG L:BCB302 0.0 67.0 0.7
MG L:BCB302 0.1 67.0 0.3
NC L:BCB302 2.0 67.7 0.3
ND L:BCB302 2.0 67.8 0.3
NA L:BCB302 2.0 69.5 0.7
ND L:BCB302 2.0 67.8 0.7
NB L:BCB302 2.1 68.1 0.7
NC L:BCB302 2.1 67.7 0.7
NA L:BCB302 2.1 69.5 0.3
NB L:BCB302 2.1 68.1 0.3
NE2 L:HIS153 2.2 69.5 0.3
NE2 L:HIS153 2.2 69.5 0.7
C1A L:BCB302 3.0 68.9 0.7
C4D L:BCB302 3.0 68.5 0.7
C4D L:BCB302 3.0 68.5 0.3
C4A L:BCB302 3.0 67.2 0.7
C1A L:BCB302 3.0 68.9 0.3
C4C L:BCB302 3.0 66.8 0.3
C1C L:BCB302 3.1 63.5 0.3
C4A L:BCB302 3.1 67.2 0.3
C1D L:BCB302 3.1 68.4 0.3
C1B L:BCB302 3.1 64.1 0.7
C4B L:BCB302 3.1 63.9 0.7
C4B L:BCB302 3.1 63.9 0.3
CE1 L:HIS153 3.1 69.6 0.3
C1D L:BCB302 3.1 68.4 0.7
C1B L:BCB302 3.1 64.1 0.3
C1C L:BCB302 3.1 63.5 0.7
C4C L:BCB302 3.1 66.8 0.7
CD2 L:HIS153 3.2 71.1 0.7
CD2 L:HIS153 3.2 71.1 0.3
CE1 L:HIS153 3.2 69.6 0.7
CHA L:BCB302 3.4 66.8 0.7
CHB L:BCB302 3.4 67.1 0.7
CHA L:BCB302 3.4 66.8 0.3
CHC L:BCB302 3.4 63.9 0.3
CHC L:BCB302 3.5 63.9 0.7
CHB L:BCB302 3.5 67.1 0.3
CHD L:BCB302 3.5 67.0 0.3
CHD L:BCB302 3.6 67.0 0.7
CBB L:BPB303 4.1 71.2 0.3
CBB L:BPB303 4.1 71.2 0.7
ND1 L:HIS153 4.2 67.8 0.3
C3D L:BCB302 4.3 69.1 0.3
C3D L:BCB302 4.3 69.1 0.7
C3C L:BCB302 4.3 67.6 0.3
C2D L:BCB302 4.3 66.2 0.3
C2A L:BCB302 4.3 69.2 0.7
C2D L:BCB302 4.3 66.2 0.7
ND1 L:HIS153 4.3 67.8 0.7
C3A L:BCB302 4.3 69.7 0.7
CG L:HIS153 4.3 67.9 0.3
C3C L:BCB302 4.4 67.6 0.7
CG L:HIS153 4.4 67.9 0.7
C2A L:BCB302 4.4 69.2 0.3
C3A L:BCB302 4.4 69.7 0.3
C3B L:BCB302 4.4 65.9 0.7
C3B L:BCB302 4.4 65.9 0.3
C2B L:BCB302 4.4 65.9 0.7
C2C L:BCB302 4.4 66.5 0.3
C2B L:BCB302 4.5 65.9 0.3
C2C L:BCB302 4.5 66.5 0.7
CE2 M:TYR208 4.5 68.0 0.7
CE2 M:TYR208 4.6 68.0 0.3
CBA L:BCB302 4.8 68.0 0.3
CBD L:BCB302 4.8 67.7 0.7
CBD L:BCB302 4.9 67.7 0.3
CBA L:BCB302 4.9 68.0 0.7
CD2 L:LEU154 4.9 70.4 0.7
CD2 L:LEU154 4.9 70.4 0.3

Magnesium binding site 4 out of 7 in 6zia

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Magnesium binding site 4 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg302

b:67.0
occ:0.30
MG L:BCB302 0.0 67.0 0.3
MG L:BCB302 0.1 67.0 0.7
NA L:BCB302 1.9 69.5 0.7
NA L:BCB302 2.0 69.5 0.3
NB L:BCB302 2.0 68.1 0.7
ND L:BCB302 2.0 67.8 0.3
NB L:BCB302 2.1 68.1 0.3
NC L:BCB302 2.1 67.7 0.3
ND L:BCB302 2.1 67.8 0.7
NC L:BCB302 2.1 67.7 0.7
NE2 L:HIS153 2.2 69.5 0.3
NE2 L:HIS153 2.2 69.5 0.7
C1A L:BCB302 2.9 68.9 0.7
C4A L:BCB302 2.9 67.2 0.7
C1A L:BCB302 3.0 68.9 0.3
C4D L:BCB302 3.0 68.5 0.7
C4D L:BCB302 3.0 68.5 0.3
C4A L:BCB302 3.0 67.2 0.3
C1B L:BCB302 3.0 64.1 0.7
CE1 L:HIS153 3.1 69.6 0.3
C1B L:BCB302 3.1 64.1 0.3
C4B L:BCB302 3.1 63.9 0.3
C4B L:BCB302 3.1 63.9 0.7
C4C L:BCB302 3.1 66.8 0.3
C1C L:BCB302 3.1 63.5 0.3
C1D L:BCB302 3.1 68.4 0.3
CE1 L:HIS153 3.2 69.6 0.7
C1D L:BCB302 3.2 68.4 0.7
C1C L:BCB302 3.2 63.5 0.7
CD2 L:HIS153 3.2 71.1 0.7
CD2 L:HIS153 3.2 71.1 0.3
C4C L:BCB302 3.2 66.8 0.7
CHB L:BCB302 3.3 67.1 0.7
CHA L:BCB302 3.4 66.8 0.7
CHA L:BCB302 3.4 66.8 0.3
CHB L:BCB302 3.4 67.1 0.3
CHC L:BCB302 3.5 63.9 0.3
CHC L:BCB302 3.5 63.9 0.7
CHD L:BCB302 3.6 67.0 0.3
CHD L:BCB302 3.7 67.0 0.7
CBB L:BPB303 4.1 71.2 0.3
CBB L:BPB303 4.1 71.2 0.7
ND1 L:HIS153 4.2 67.8 0.3
C2A L:BCB302 4.3 69.2 0.7
C3A L:BCB302 4.3 69.7 0.7
C3D L:BCB302 4.3 69.1 0.3
C3D L:BCB302 4.3 69.1 0.7
ND1 L:HIS153 4.3 67.8 0.7
C2A L:BCB302 4.3 69.2 0.3
CG L:HIS153 4.3 67.9 0.3
C3A L:BCB302 4.3 69.7 0.3
CG L:HIS153 4.3 67.9 0.7
C3C L:BCB302 4.3 67.6 0.3
C2D L:BCB302 4.3 66.2 0.3
C2D L:BCB302 4.4 66.2 0.7
C2B L:BCB302 4.4 65.9 0.7
C3B L:BCB302 4.4 65.9 0.7
C3B L:BCB302 4.4 65.9 0.3
C2B L:BCB302 4.4 65.9 0.3
C3C L:BCB302 4.4 67.6 0.7
C2C L:BCB302 4.5 66.5 0.3
C2C L:BCB302 4.6 66.5 0.7
CE2 M:TYR208 4.6 68.0 0.7
CE2 M:TYR208 4.6 68.0 0.3
CBA L:BCB302 4.8 68.0 0.3
CBD L:BCB302 4.8 67.7 0.7
CBA L:BCB302 4.8 68.0 0.7
CBD L:BCB302 4.9 67.7 0.3
CD2 L:LEU154 4.9 70.4 0.7
CD2 L:LEU154 4.9 70.4 0.3
CMA L:BCB302 5.0 69.4 0.7

Magnesium binding site 5 out of 7 in 6zia

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Magnesium binding site 5 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg304

b:72.5
occ:1.00
MG L:BCB304 0.0 72.5 1.0
NA L:BCB304 2.0 72.5 1.0
ND L:BCB304 2.0 68.5 1.0
NB L:BCB304 2.0 73.6 1.0
NC L:BCB304 2.1 75.3 1.0
NE2 M:HIS180 2.1 69.9 1.0
C1A L:BCB304 3.0 68.7 1.0
C4A L:BCB304 3.0 73.0 1.0
C4D L:BCB304 3.0 67.4 1.0
C1B L:BCB304 3.1 73.1 1.0
C4B L:BCB304 3.1 72.8 1.0
CE1 M:HIS180 3.1 71.3 1.0
C4C L:BCB304 3.1 70.5 1.0
C1D L:BCB304 3.1 73.0 1.0
C1C L:BCB304 3.1 68.1 1.0
CD2 M:HIS180 3.2 70.7 1.0
CHB L:BCB304 3.4 71.0 1.0
CHA L:BCB304 3.4 69.3 1.0
CHC L:BCB304 3.5 72.7 1.0
CHD L:BCB304 3.6 71.2 1.0
ND1 M:HIS180 4.2 69.1 1.0
C3D L:BCB304 4.3 69.8 1.0
CG M:HIS180 4.3 70.1 1.0
C2A L:BCB304 4.3 71.5 1.0
C3C L:BCB304 4.3 69.5 1.0
C3A L:BCB304 4.3 71.7 1.0
C2D L:BCB304 4.4 71.0 1.0
C3B L:BCB304 4.4 75.5 1.0
OBB L:BPB305 4.4 89.5 1.0
C2B L:BCB304 4.4 73.4 1.0
C2C L:BCB304 4.5 67.1 1.0
CE2 L:PHE181 4.8 71.5 1.0
CBA L:BCB304 4.8 80.2 1.0
CBD L:BCB304 4.9 71.7 1.0

Magnesium binding site 6 out of 7 in 6zia

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Magnesium binding site 6 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Mg403

b:66.1
occ:0.70
MG M:BCB403 0.0 66.1 0.7
MG M:BCB403 0.2 66.1 0.3
NB M:BCB403 1.9 60.1 0.3
NC M:BCB403 2.0 62.8 0.3
NA M:BCB403 2.0 66.9 0.7
ND M:BCB403 2.0 62.5 0.7
NC M:BCB403 2.0 62.8 0.7
NB M:BCB403 2.0 60.1 0.7
NA M:BCB403 2.1 66.9 0.3
NE2 M:HIS200 2.1 69.1 0.7
NE2 M:HIS200 2.1 69.1 0.3
ND M:BCB403 2.2 62.5 0.3
C4B M:BCB403 2.9 59.0 0.3
C1B M:BCB403 2.9 59.1 0.3
CE1 M:HIS200 3.0 71.8 0.7
C4D M:BCB403 3.0 64.5 0.7
C1A M:BCB403 3.0 65.7 0.7
C4A M:BCB403 3.0 63.6 0.3
C1C M:BCB403 3.0 59.7 0.3
C4A M:BCB403 3.0 63.6 0.7
CE1 M:HIS200 3.0 71.8 0.3
C1B M:BCB403 3.1 59.1 0.7
C4B M:BCB403 3.1 59.0 0.7
C1A M:BCB403 3.1 65.7 0.3
C1C M:BCB403 3.1 59.7 0.7
C4C M:BCB403 3.1 62.6 0.7
C1D M:BCB403 3.1 67.9 0.7
C4C M:BCB403 3.1 62.6 0.3
C4D M:BCB403 3.2 64.5 0.3
CD2 M:HIS200 3.2 68.4 0.7
CD2 M:HIS200 3.2 68.4 0.3
CHC M:BCB403 3.2 59.3 0.3
C1D M:BCB403 3.3 67.9 0.3
CHB M:BCB403 3.3 60.8 0.3
CBB L:BCB301 3.3 64.6 0.3
CHA M:BCB403 3.4 64.9 0.7
CHB M:BCB403 3.4 60.8 0.7
CBB L:BCB301 3.4 64.6 0.7
CHC M:BCB403 3.4 59.3 0.7
CHA M:BCB403 3.5 64.9 0.3
CAB L:BCB301 3.5 62.7 0.3
CHD M:BCB403 3.6 66.1 0.7
CAB L:BCB301 3.6 62.7 0.7
CHD M:BCB403 3.7 66.1 0.3
OBB L:BCB301 3.8 66.1 0.3
OBB L:BCB301 3.8 66.1 0.7
ND1 M:HIS200 4.1 64.9 0.7
ND1 M:HIS200 4.2 64.9 0.3
C3B M:BCB403 4.2 62.0 0.3
C2B M:BCB403 4.2 60.5 0.3
C3B L:BCB301 4.3 62.0 0.3
C3D M:BCB403 4.3 65.8 0.7
CG M:HIS200 4.3 65.4 0.7
CG M:HIS200 4.3 65.4 0.3
C3C M:BCB403 4.3 64.8 0.7
C2D M:BCB403 4.3 65.2 0.7
C2A M:BCB403 4.3 68.4 0.7
C3C M:BCB403 4.3 64.8 0.3
C3B L:BCB301 4.3 62.0 0.7
C3A M:BCB403 4.3 67.1 0.3
C3A M:BCB403 4.4 67.1 0.7
C3B M:BCB403 4.4 62.0 0.7
C2B M:BCB403 4.4 60.5 0.7
C2C M:BCB403 4.4 64.7 0.3
C2A M:BCB403 4.4 68.4 0.3
C2C M:BCB403 4.4 64.7 0.7
C3D M:BCB403 4.5 65.8 0.3
C2D M:BCB403 4.5 65.2 0.3
CBD M:BCB403 4.8 69.7 0.7
CMC M:BCB403 4.8 66.9 0.7
CD1 M:ILE204 4.8 67.8 0.3
CD1 M:ILE204 4.9 67.8 0.7
CMC M:BCB403 5.0 66.9 0.3
C4B L:BCB301 5.0 60.5 0.3
CBD M:BCB403 5.0 69.7 0.3

Magnesium binding site 7 out of 7 in 6zia

Go back to Magnesium Binding Sites List in 6zia
Magnesium binding site 7 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 8 Us Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Mg403

b:66.1
occ:0.30
MG M:BCB403 0.0 66.1 0.3
MG M:BCB403 0.2 66.1 0.7
ND M:BCB403 1.8 62.5 0.7
NA M:BCB403 2.0 66.9 0.7
NA M:BCB403 2.0 66.9 0.3
ND M:BCB403 2.0 62.5 0.3
NC M:BCB403 2.0 62.8 0.3
NB M:BCB403 2.1 60.1 0.3
NC M:BCB403 2.1 62.8 0.7
NE2 M:HIS200 2.2 69.1 0.7
NB M:BCB403 2.2 60.1 0.7
NE2 M:HIS200 2.3 69.1 0.3
C4D M:BCB403 2.8 64.5 0.7
C1A M:BCB403 2.9 65.7 0.7
C1D M:BCB403 2.9 67.9 0.7
C1A M:BCB403 3.0 65.7 0.3
C4A M:BCB403 3.0 63.6 0.3
C4D M:BCB403 3.0 64.5 0.3
C4A M:BCB403 3.0 63.6 0.7
C1B M:BCB403 3.1 59.1 0.3
C4C M:BCB403 3.1 62.6 0.7
C4B M:BCB403 3.1 59.0 0.3
C1C M:BCB403 3.1 59.7 0.3
C4C M:BCB403 3.1 62.6 0.3
C1D M:BCB403 3.1 67.9 0.3
CE1 M:HIS200 3.1 71.8 0.7
C1C M:BCB403 3.2 59.7 0.7
C1B M:BCB403 3.2 59.1 0.7
CHA M:BCB403 3.2 64.9 0.7
CE1 M:HIS200 3.2 71.8 0.3
CBB L:BCB301 3.2 64.6 0.3
CD2 M:HIS200 3.3 68.4 0.7
C4B M:BCB403 3.3 59.0 0.7
CD2 M:HIS200 3.3 68.4 0.3
CBB L:BCB301 3.3 64.6 0.7
CHA M:BCB403 3.4 64.9 0.3
CHB M:BCB403 3.4 60.8 0.3
CHC M:BCB403 3.4 59.3 0.3
CHD M:BCB403 3.5 66.1 0.7
CHB M:BCB403 3.5 60.8 0.7
CAB L:BCB301 3.5 62.7 0.3
CAB L:BCB301 3.6 62.7 0.7
CHD M:BCB403 3.6 66.1 0.3
CHC M:BCB403 3.6 59.3 0.7
OBB L:BCB301 3.7 66.1 0.3
OBB L:BCB301 3.8 66.1 0.7
C3D M:BCB403 4.1 65.8 0.7
C2D M:BCB403 4.1 65.2 0.7
C2A M:BCB403 4.3 68.4 0.7
C3B L:BCB301 4.3 62.0 0.3
C3D M:BCB403 4.3 65.8 0.3
ND1 M:HIS200 4.3 64.9 0.7
C3A M:BCB403 4.3 67.1 0.3
C3A M:BCB403 4.3 67.1 0.7
C3C M:BCB403 4.3 64.8 0.7
C2A M:BCB403 4.3 68.4 0.3
C2D M:BCB403 4.3 65.2 0.3
C3C M:BCB403 4.3 64.8 0.3
ND1 M:HIS200 4.4 64.9 0.3
C3B L:BCB301 4.4 62.0 0.7
CG M:HIS200 4.4 65.4 0.7
C3B M:BCB403 4.4 62.0 0.3
C2B M:BCB403 4.4 60.5 0.3
CG M:HIS200 4.4 65.4 0.3
C2C M:BCB403 4.5 64.7 0.3
C2C M:BCB403 4.5 64.7 0.7
C2B M:BCB403 4.6 60.5 0.7
C3B M:BCB403 4.6 62.0 0.7
CBD M:BCB403 4.6 69.7 0.7
CBD M:BCB403 4.8 69.7 0.3
CMC M:BCB403 4.9 66.9 0.7
CAD M:BCB403 5.0 66.1 0.7
CD2 M:PHE194 5.0 68.2 0.3

Reference:

R.Dods, P.Baath, D.Morozov, V.A.Gagner, A.Arnlund, H.L.Luk, J.Kuebel, M.Maj, A.Vallejos, C.Wickstrand, R.Bosman, K.R.Beyerlein, G.Nelson, M.Liang, D.Milathianaki, J.Robinson, R.Harimoorthy, P.Berntsen, E.Malmerberg, L.Johansson, R.Andersson, S.Carbajo, E.Claesson, C.E.Conrad, P.Dahl, G.Hammarin, M.S.Hunter, C.Li, S.Lisova, A.Royant, C.Safari, A.Sharma, G.J.Williams, O.Yefanov, S.Westenhoff, J.Davidsson, D.P.Deponte, S.Boutet, A.Barty, G.Katona, G.Groenhof, G.Braenden, R.Neutze. Ultrafast Structural Changes Within A Photosynthetic Reaction Centre Nature 2020.
ISSN: ESSN 1476-4687
DOI: 10.1038/S41586-020-3000-7
Page generated: Wed Oct 2 02:20:46 2024

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