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Magnesium in PDB 7a4p: Structure of Small High-Light Grown Chlorella Ohadii Photosystem I

Enzymatic activity of Structure of Small High-Light Grown Chlorella Ohadii Photosystem I

All present enzymatic activity of Structure of Small High-Light Grown Chlorella Ohadii Photosystem I:
1.97.1.12;

Other elements in 7a4p:

The structure of Structure of Small High-Light Grown Chlorella Ohadii Photosystem I also contains other interesting chemical elements:

Iron (Fe) 12 atoms

Magnesium Binding Sites:

Magnesium binding site 1 out of 223 in 7a4p

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Magnesium binding site 1 out of 223 in the Structure of Small High-Light Grown Chlorella Ohadii Photosystem I


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Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Small High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1011

b:46.1
occ:1.00
MG A:CL01011 0.0 46.1 1.0
ND A:CL01011 2.0 46.1 1.0
NB A:CL01011 2.0 46.1 1.0
NC A:CL01011 2.1 46.1 1.0
NA A:CL01011 2.3 46.1 1.0
NE2 A:HIS676 2.8 43.8 1.0
C4D A:CL01011 3.0 46.1 1.0
C4B A:CL01011 3.0 46.1 1.0
C1B A:CL01011 3.1 46.1 1.0
C1C A:CL01011 3.1 46.1 1.0
C1D A:CL01011 3.1 46.1 1.0
C4A A:CL01011 3.2 46.1 1.0
C4C A:CL01011 3.2 46.1 1.0
C1A A:CL01011 3.2 46.1 1.0
CHC A:CL01011 3.3 46.1 1.0
CHB A:CL01011 3.4 46.1 1.0
CHA A:CL01011 3.5 46.1 1.0
CHD A:CL01011 3.6 46.1 1.0
CE1 A:HIS676 3.6 43.8 1.0
CBB B:CLA1021 3.7 48.3 1.0
CD2 A:HIS676 3.9 43.8 1.0
C3D A:CL01011 4.2 46.1 1.0
CHC B:CLA1021 4.2 48.3 1.0
C3B A:CL01011 4.3 46.1 1.0
C4B B:CLA1021 4.3 48.3 1.0
CAB B:CLA1021 4.3 48.3 1.0
C3B B:CLA1021 4.3 48.3 1.0
C2B A:CL01011 4.4 46.1 1.0
C2D A:CL01011 4.4 46.1 1.0
C2C A:CL01011 4.4 46.1 1.0
C3C A:CL01011 4.4 46.1 1.0
C3A A:CL01011 4.5 46.1 1.0
C2A A:CL01011 4.5 46.1 1.0
ND1 A:HIS676 4.8 43.8 1.0
C1C B:CLA1021 4.8 48.3 1.0
CG A:HIS676 5.0 43.8 1.0
CBD A:CL01011 5.0 46.1 1.0

Magnesium binding site 2 out of 223 in 7a4p

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Magnesium binding site 2 out of 223 in the Structure of Small High-Light Grown Chlorella Ohadii Photosystem I


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Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of Small High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1012

b:45.7
occ:1.00
MG A:CLA1012 0.0 45.7 1.0
ND A:CLA1012 2.0 45.7 1.0
NB A:CLA1012 2.0 45.7 1.0
NC A:CLA1012 2.1 45.7 1.0
NA A:CLA1012 2.2 45.7 1.0
C4D A:CLA1012 2.9 45.7 1.0
C4B A:CLA1012 3.0 45.7 1.0
C1C A:CLA1012 3.0 45.7 1.0
C1B A:CLA1012 3.1 45.7 1.0
C1D A:CLA1012 3.1 45.7 1.0
C4A A:CLA1012 3.1 45.7 1.0
C4C A:CLA1012 3.2 45.7 1.0
C1A A:CLA1012 3.2 45.7 1.0
CHC A:CLA1012 3.3 45.7 1.0
CBB A:CLA1013 3.3 44.0 1.0
CHB A:CLA1012 3.4 45.7 1.0
CHA A:CLA1012 3.4 45.7 1.0
CHD A:CLA1012 3.5 45.7 1.0
CAB A:CLA1013 4.1 44.0 1.0
C3D A:CLA1012 4.1 45.7 1.0
C3B A:CLA1012 4.2 45.7 1.0
C2D A:CLA1012 4.3 45.7 1.0
C2B A:CLA1012 4.3 45.7 1.0
C2C A:CLA1012 4.4 45.7 1.0
C3C A:CLA1012 4.4 45.7 1.0
C3A A:CLA1012 4.5 45.7 1.0
C2A A:CLA1012 4.5 45.7 1.0
CB A:ALA680 4.6 40.6 1.0
OD1 B:ASN586 4.7 45.2 1.0
C3B A:CLA1013 4.9 44.0 1.0
CBD A:CLA1012 4.9 45.7 1.0

Magnesium binding site 3 out of 223 in 7a4p

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Magnesium binding site 3 out of 223 in the Structure of Small High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structure of Small High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1013

b:44.0
occ:1.00
MG A:CLA1013 0.0 44.0 1.0
ND A:CLA1013 2.0 44.0 1.0
NB A:CLA1013 2.0 44.0 1.0
NC A:CLA1013 2.1 44.0 1.0
NA A:CLA1013 2.2 44.0 1.0
C4D A:CLA1013 2.9 44.0 1.0
C4B A:CLA1013 3.0 44.0 1.0
C1C A:CLA1013 3.0 44.0 1.0
C1B A:CLA1013 3.1 44.0 1.0
C1D A:CLA1013 3.1 44.0 1.0
C4C A:CLA1013 3.1 44.0 1.0
C4A A:CLA1013 3.1 44.0 1.0
C1A A:CLA1013 3.2 44.0 1.0
CE A:MET684 3.2 42.0 1.0
CHC A:CLA1013 3.3 44.0 1.0
CHB A:CLA1013 3.4 44.0 1.0
CHA A:CLA1013 3.4 44.0 1.0
CHD A:CLA1013 3.5 44.0 1.0
NE1 B:TRP583 3.6 47.4 1.0
CZ2 B:TRP583 3.9 47.4 1.0
CE2 B:TRP583 4.1 47.4 1.0
C3D A:CLA1013 4.1 44.0 1.0
C3B A:CLA1013 4.2 44.0 1.0
C2B A:CLA1013 4.3 44.0 1.0
C2D A:CLA1013 4.3 44.0 1.0
C2C A:CLA1013 4.3 44.0 1.0
C3C A:CLA1013 4.3 44.0 1.0
C3A A:CLA1013 4.5 44.0 1.0
CG A:MET684 4.5 42.0 1.0
C2A A:CLA1013 4.5 44.0 1.0
SD A:MET684 4.6 42.0 1.0
CB A:MET684 4.8 42.0 1.0
CD1 B:TRP583 4.8 47.4 1.0
CBD A:CLA1013 4.9 44.0 1.0
CMC A:CLA1012 5.0 45.7 1.0

Magnesium binding site 4 out of 223 in 7a4p

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Magnesium binding site 4 out of 223 in the Structure of Small High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Structure of Small High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1102

b:42.3
occ:1.00
MG A:CLA1102 0.0 42.3 1.0
ND A:CLA1102 2.0 42.3 1.0
NB A:CLA1102 2.0 42.3 1.0
NC A:CLA1102 2.1 42.3 1.0
NA A:CLA1102 2.2 42.3 1.0
NE2 A:HIS57 2.8 41.3 1.0
C4D A:CLA1102 2.9 42.3 1.0
C4B A:CLA1102 3.0 42.3 1.0
C1C A:CLA1102 3.0 42.3 1.0
C1B A:CLA1102 3.0 42.3 1.0
C1D A:CLA1102 3.1 42.3 1.0
C4A A:CLA1102 3.1 42.3 1.0
C1A A:CLA1102 3.2 42.3 1.0
C4C A:CLA1102 3.2 42.3 1.0
CHC A:CLA1102 3.3 42.3 1.0
CHB A:CLA1102 3.4 42.3 1.0
CHA A:CLA1102 3.5 42.3 1.0
CHD A:CLA1102 3.5 42.3 1.0
CD2 A:HIS57 3.7 41.3 1.0
CE1 A:HIS57 3.7 41.3 1.0
C7 A:CLA1109 3.9 41.8 1.0
C3D A:CLA1102 4.2 42.3 1.0
C3B A:CLA1102 4.2 42.3 1.0
C2B A:CLA1102 4.3 42.3 1.0
C2D A:CLA1102 4.3 42.3 1.0
C2C A:CLA1102 4.3 42.3 1.0
C9 A:CLA1109 4.4 41.8 1.0
C3C A:CLA1102 4.4 42.3 1.0
C6 A:CLA1109 4.4 41.8 1.0
C3A A:CLA1102 4.5 42.3 1.0
C2A A:CLA1102 4.5 42.3 1.0
C8 A:CLA1109 4.5 41.8 1.0
C10 A:CLA1109 4.6 41.8 1.0
CG A:HIS57 4.9 41.3 1.0
ND1 A:HIS57 4.9 41.3 1.0
CBB A:CLA1101 4.9 41.9 1.0
CBD A:CLA1102 4.9 42.3 1.0

Magnesium binding site 5 out of 223 in 7a4p

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Magnesium binding site 5 out of 223 in the Structure of Small High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Structure of Small High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1103

b:40.9
occ:1.00
MG A:CLA1103 0.0 40.9 1.0
ND A:CLA1103 2.0 40.9 1.0
NB A:CLA1103 2.0 40.9 1.0
NC A:CLA1103 2.1 40.9 1.0
NA A:CLA1103 2.2 40.9 1.0
C4D A:CLA1103 2.9 40.9 1.0
C4B A:CLA1103 3.0 40.9 1.0
C1C A:CLA1103 3.0 40.9 1.0
NE2 A:HIS77 3.0 39.6 1.0
C1B A:CLA1103 3.1 40.9 1.0
CMB A:CLA1128 3.1 40.1 1.0
C1D A:CLA1103 3.1 40.9 1.0
C4A A:CLA1103 3.1 40.9 1.0
C1A A:CLA1103 3.2 40.9 1.0
C4C A:CLA1103 3.2 40.9 1.0
CHC A:CLA1103 3.3 40.9 1.0
CHB A:CLA1103 3.4 40.9 1.0
CHA A:CLA1103 3.4 40.9 1.0
CHD A:CLA1103 3.5 40.9 1.0
CD2 A:HIS77 3.5 39.6 1.0
C3D A:CLA1103 4.1 40.9 1.0
CE1 A:HIS77 4.2 39.6 1.0
CBB A:CLA1128 4.2 40.1 1.0
C3B A:CLA1103 4.2 40.9 1.0
C2B A:CLA1103 4.3 40.9 1.0
C2D A:CLA1103 4.3 40.9 1.0
C2C A:CLA1103 4.3 40.9 1.0
C3C A:CLA1103 4.4 40.9 1.0
C3A A:CLA1103 4.5 40.9 1.0
C2A A:CLA1103 4.5 40.9 1.0
C2B A:CLA1128 4.5 40.1 1.0
CG A:HIS77 4.8 39.6 1.0
CBD A:CLA1103 4.9 40.9 1.0
CG1 A:VAL73 5.0 41.0 1.0

Magnesium binding site 6 out of 223 in 7a4p

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Magnesium binding site 6 out of 223 in the Structure of Small High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Structure of Small High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1104

b:39.4
occ:1.00
MG A:CLA1104 0.0 39.4 1.0
ND A:CLA1104 2.0 39.4 1.0
NB A:CLA1104 2.0 39.4 1.0
NC A:CLA1104 2.1 39.4 1.0
NA A:CLA1104 2.2 39.4 1.0
C4D A:CLA1104 2.9 39.4 1.0
C4B A:CLA1104 3.0 39.4 1.0
C1C A:CLA1104 3.0 39.4 1.0
C1B A:CLA1104 3.1 39.4 1.0
C1D A:CLA1104 3.1 39.4 1.0
C4A A:CLA1104 3.1 39.4 1.0
C4C A:CLA1104 3.2 39.4 1.0
C1A A:CLA1104 3.2 39.4 1.0
CHC A:CLA1104 3.3 39.4 1.0
CHB A:CLA1104 3.4 39.4 1.0
CHA A:CLA1104 3.5 39.4 1.0
CHD A:CLA1104 3.5 39.4 1.0
OE1 A:GLN80 3.5 37.9 1.0
NE2 A:GLN80 3.7 37.9 1.0
CD A:GLN80 3.9 37.9 1.0
C17 A:CLA1104 3.9 39.4 1.0
C16 A:CLA1104 4.0 39.4 1.0
C18 A:CLA1104 4.1 39.4 1.0
C3D A:CLA1104 4.1 39.4 1.0
C3B A:CLA1104 4.2 39.4 1.0
C2B A:CLA1104 4.3 39.4 1.0
C2D A:CLA1104 4.3 39.4 1.0
C2C A:CLA1104 4.3 39.4 1.0
C15 A:CLA1104 4.3 39.4 1.0
C3C A:CLA1104 4.4 39.4 1.0
C3A A:CLA1104 4.5 39.4 1.0
C2A A:CLA1104 4.5 39.4 1.0
CMA A:CLA1103 4.7 40.9 1.0
CBD A:CLA1104 4.9 39.4 1.0
C20 A:CLA1104 4.9 39.4 1.0

Magnesium binding site 7 out of 223 in 7a4p

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Magnesium binding site 7 out of 223 in the Structure of Small High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Structure of Small High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1105

b:42.1
occ:1.00
MG A:CLA1105 0.0 42.1 1.0
ND A:CLA1105 2.0 42.1 1.0
NB A:CLA1105 2.0 42.1 1.0
NC A:CLA1105 2.1 42.1 1.0
NA A:CLA1105 2.2 42.1 1.0
C4D A:CLA1105 2.9 42.1 1.0
CE1 A:HIS94 2.9 43.7 1.0
C4B A:CLA1105 3.0 42.1 1.0
C1C A:CLA1105 3.0 42.1 1.0
C1B A:CLA1105 3.1 42.1 1.0
C1D A:CLA1105 3.1 42.1 1.0
C4A A:CLA1105 3.1 42.1 1.0
C1A A:CLA1105 3.2 42.1 1.0
C4C A:CLA1105 3.2 42.1 1.0
CHC A:CLA1105 3.3 42.1 1.0
CHB A:CLA1105 3.4 42.1 1.0
CHA A:CLA1105 3.5 42.1 1.0
CHD A:CLA1105 3.5 42.1 1.0
NE2 A:HIS94 3.8 43.7 1.0
C8B A:DGD5005 3.8 44.6 1.0
ND1 A:HIS94 3.9 43.7 1.0
C6B A:DGD5005 4.0 44.6 1.0
C3D A:CLA1105 4.2 42.1 1.0
C3B A:CLA1105 4.2 42.1 1.0
C2B A:CLA1105 4.3 42.1 1.0
C9B A:DGD5005 4.3 44.6 1.0
C2D A:CLA1105 4.3 42.1 1.0
C2C A:CLA1105 4.4 42.1 1.0
C7B A:DGD5005 4.4 44.6 1.0
C3C A:CLA1105 4.4 42.1 1.0
C3A A:CLA1105 4.5 42.1 1.0
C2A A:CLA1105 4.5 42.1 1.0
CBD A:CLA1105 4.9 42.1 1.0
CBA A:CLA1105 5.0 42.1 1.0

Magnesium binding site 8 out of 223 in 7a4p

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Magnesium binding site 8 out of 223 in the Structure of Small High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Structure of Small High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1106

b:43.8
occ:1.00
MG A:CLA1106 0.0 43.8 1.0
ND A:CLA1106 2.0 43.8 1.0
NB A:CLA1106 2.0 43.8 1.0
NC A:CLA1106 2.1 43.8 1.0
NA A:CLA1106 2.2 43.8 1.0
C4D A:CLA1106 2.9 43.8 1.0
C4B A:CLA1106 3.0 43.8 1.0
OE1 A:GLN116 3.0 44.1 1.0
C1C A:CLA1106 3.0 43.8 1.0
C1B A:CLA1106 3.1 43.8 1.0
C1D A:CLA1106 3.1 43.8 1.0
C4A A:CLA1106 3.1 43.8 1.0
C1A A:CLA1106 3.2 43.8 1.0
C4C A:CLA1106 3.2 43.8 1.0
CHC A:CLA1106 3.3 43.8 1.0
CHB A:CLA1106 3.4 43.8 1.0
CHA A:CLA1106 3.5 43.8 1.0
CHD A:CLA1106 3.5 43.8 1.0
C6 A:CLA1126 3.7 40.6 1.0
CD A:GLN116 3.8 44.1 1.0
NE2 A:GLN116 3.9 44.1 1.0
C2 A:CLA1126 3.9 40.6 1.0
C3D A:CLA1106 4.2 43.8 1.0
C3B A:CLA1106 4.2 43.8 1.0
C2B A:CLA1106 4.3 43.8 1.0
C2D A:CLA1106 4.3 43.8 1.0
C2C A:CLA1106 4.3 43.8 1.0
C3C A:CLA1106 4.4 43.8 1.0
C3A A:CLA1106 4.5 43.8 1.0
C2A A:CLA1106 4.5 43.8 1.0
C5 A:CLA1126 4.5 40.6 1.0
C3 A:CLA1126 4.6 40.6 1.0
O1A A:CLA1106 4.7 43.8 1.0
C7 A:CLA1126 4.8 40.6 1.0
C1 A:CLA1126 4.9 40.6 1.0
CBD A:CLA1106 4.9 43.8 1.0

Magnesium binding site 9 out of 223 in 7a4p

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Magnesium binding site 9 out of 223 in the Structure of Small High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Structure of Small High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1107

b:39.4
occ:1.00
MG A:CLA1107 0.0 39.4 1.0
ND A:CLA1107 2.0 39.4 1.0
NB A:CLA1107 2.0 39.4 1.0
NC A:CLA1107 2.1 39.4 1.0
NA A:CLA1107 2.2 39.4 1.0
OE1 A:GLN124 2.7 40.9 1.0
C4D A:CLA1107 2.9 39.4 1.0
C4B A:CLA1107 3.0 39.4 1.0
C1C A:CLA1107 3.0 39.4 1.0
C1B A:CLA1107 3.0 39.4 1.0
C1D A:CLA1107 3.1 39.4 1.0
C4A A:CLA1107 3.1 39.4 1.0
C1A A:CLA1107 3.2 39.4 1.0
C4C A:CLA1107 3.2 39.4 1.0
CHC A:CLA1107 3.3 39.4 1.0
CHB A:CLA1107 3.4 39.4 1.0
CHA A:CLA1107 3.5 39.4 1.0
CHD A:CLA1107 3.5 39.4 1.0
C20 A:CLA1126 3.7 40.6 1.0
CD A:GLN124 3.7 40.9 1.0
C3D A:CLA1107 4.1 39.4 1.0
NE2 A:GLN124 4.2 40.9 1.0
C3B A:CLA1107 4.2 39.4 1.0
C2B A:CLA1107 4.3 39.4 1.0
C2D A:CLA1107 4.3 39.4 1.0
C2C A:CLA1107 4.3 39.4 1.0
C17 A:CLA1126 4.4 40.6 1.0
C3C A:CLA1107 4.4 39.4 1.0
C18 A:CLA1126 4.5 40.6 1.0
C3A A:CLA1107 4.5 39.4 1.0
C2A A:CLA1107 4.5 39.4 1.0
C19 A:CLA1126 4.7 40.6 1.0
CBD A:CLA1107 4.9 39.4 1.0
CG A:GLN124 5.0 40.9 1.0

Magnesium binding site 10 out of 223 in 7a4p

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Magnesium binding site 10 out of 223 in the Structure of Small High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Structure of Small High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1108

b:52.6
occ:1.00
MG A:CLA1108 0.0 52.6 1.0
ND A:CLA1108 2.0 52.6 1.0
NB A:CLA1108 2.0 52.6 1.0
NC A:CLA1108 2.1 52.6 1.0
NA A:CLA1108 2.2 52.6 1.0
NE2 A:HIS180 2.7 46.7 1.0
C4D A:CLA1108 2.9 52.6 1.0
C4B A:CLA1108 3.0 52.6 1.0
C1C A:CLA1108 3.0 52.6 1.0
C1B A:CLA1108 3.1 52.6 1.0
C1D A:CLA1108 3.1 52.6 1.0
C4A A:CLA1108 3.1 52.6 1.0
C1A A:CLA1108 3.2 52.6 1.0
C4C A:CLA1108 3.2 52.6 1.0
CHC A:CLA1108 3.3 52.6 1.0
CE1 A:HIS180 3.4 46.7 1.0
CHB A:CLA1108 3.4 52.6 1.0
CHA A:CLA1108 3.4 52.6 1.0
CHD A:CLA1108 3.5 52.6 1.0
C19 A:CLA1111 3.6 47.4 1.0
CD2 A:HIS180 3.8 46.7 1.0
C3D A:CLA1108 4.1 52.6 1.0
C3B A:CLA1108 4.2 52.6 1.0
C2B A:CLA1108 4.3 52.6 1.0
C18 A:CLA1111 4.3 47.4 1.0
C2D A:CLA1108 4.3 52.6 1.0
C20 A:CLA1111 4.3 47.4 1.0
C17 A:CLA1111 4.3 47.4 1.0
C2C A:CLA1108 4.3 52.6 1.0
C3C A:CLA1108 4.4 52.6 1.0
C3A A:CLA1108 4.5 52.6 1.0
C2A A:CLA1108 4.5 52.6 1.0
ND1 A:HIS180 4.6 46.7 1.0
CG A:HIS180 4.8 46.7 1.0
CBD A:CLA1108 4.9 52.6 1.0
C16 A:CLA1111 5.0 47.4 1.0

Reference:

I.Caspy, N.Nelson, R.Nechushtai, Y.Shkolnisky, E.Neumann. Structural and Functional Alterations in Photosystem I of Chlorella Ohadii Grown at High and Low Light Conditions To Be Published.
Page generated: Wed Oct 2 09:05:15 2024

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Zn in 8ZUF
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