Magnesium in PDB 7amv: Atomic Structure of the Poxvirus Transcription Pre-Initiation Complex in the Initially Melted State

Enzymatic activity of Atomic Structure of the Poxvirus Transcription Pre-Initiation Complex in the Initially Melted State

All present enzymatic activity of Atomic Structure of the Poxvirus Transcription Pre-Initiation Complex in the Initially Melted State:
2.7.7.6;

Other elements in 7amv:

The structure of Atomic Structure of the Poxvirus Transcription Pre-Initiation Complex in the Initially Melted State also contains other interesting chemical elements:

Zinc

(Zn)

4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Atomic Structure of the Poxvirus Transcription Pre-Initiation Complex in the Initially Melted State (pdb code 7amv). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Atomic Structure of the Poxvirus Transcription Pre-Initiation Complex in the Initially Melted State, PDB code: 7amv:

Magnesium binding site 1 out of 1 in 7amv

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Magnesium Binding Sites List in 7amv

Magnesium binding site 1 out of 1 in the Atomic Structure of the Poxvirus Transcription Pre-Initiation Complex in the Initially Melted State

Mono view

Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Atomic Structure of the Poxvirus Transcription Pre-Initiation Complex in the Initially Melted State within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Mg1301 b:21.5 occ:1.00	OD1	A:ASP419	2.1	58.8	1.0
	OD2	A:ASP419	2.3	58.8	1.0
	OD1	A:ASP417	2.5	59.8	1.0
	CG	A:ASP419	2.5	58.8	1.0
	CB	A:ASP415	3.0	62.1	1.0
	CG	A:ASP417	3.3	59.8	1.0
	OD2	A:ASP417	3.5	59.8	1.0
	OD2	A:ASP415	3.7	62.1	1.0
	CG	A:ASP415	3.7	62.1	1.0
	O	A:ASP415	3.9	62.1	1.0
	CB	A:ASP419	4.0	58.8	1.0
	CA	A:ASP415	4.1	62.1	1.0
	C	A:ASP415	4.3	62.1	1.0
	N	A:ASP415	4.3	62.1	1.0
	N	A:ASP419	4.6	58.8	1.0
	OD1	A:ASP415	4.7	62.1	1.0
	CA	A:ASP419	4.7	58.8	1.0
	NH2	A:ARG380	4.7	54.9	1.0
	CB	A:ASP417	4.8	59.8	1.0
	N	A:ASP417	4.9	59.8	1.0

Reference:

C.Grimm, J.Bartuli, B.Boettcher, A.A.Szalay, U.Fischer. Structural Basis of the Complete Poxvirus Transcription Initiation Process Nat.Struct.Mol.Biol. 2021.
ISSN: ESSN 1545-9985
DOI: 10.1038/S41594-021-00655-W

Page generated: Wed Oct 2 10:08:29 2024

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