Magnesium in PDB 7ch8: Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V

The structure of Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V also contains other interesting chemical elements:

Vanadium

(V)

2 atoms

The binding sites of Magnesium atom in the Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V (pdb code 7ch8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V, PDB code: 7ch8:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V within 5.0Å range: probe atom residue distance (Å) B Occ I:Mg302 b:88.0 occ:1.00 O2G I:AD9301 2.2 79.1 1.0 O3G I:AD9301 2.2 79.1 1.0 OG1 I:THR48 2.2 63.5 1.0 VG I:AD9301 2.6 79.1 1.0 CB I:THR48 2.6 63.5 1.0 O3A I:AD9301 2.6 79.1 1.0 O3B I:AD9301 3.1 79.1 1.0 CG2 I:THR48 3.2 63.5 1.0 PB I:AD9301 3.2 79.1 1.0 O2B I:AD9301 3.3 79.1 1.0 PA I:AD9301 3.9 79.1 1.0 CA I:THR48 4.0 63.5 1.0 O1G I:AD9301 4.0 79.1 1.0 O2A I:AD9301 4.1 79.1 1.0 N I:THR48 4.3 63.5 1.0 O1A I:AD9301 4.4 79.1 1.0 O1B I:AD9301 4.7 79.1 1.0 NE2 I:GLN92 4.7 36.9 1.0 OD1 I:ASP169 4.8 43.8 1.0 C I:THR48 5.0 63.5 1.0

Magnesium binding site 2 out of 2 in the Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryo-Em Structure of P.Aeruginosa Mlafebd with Adp-V within 5.0Å range: probe atom residue distance (Å) B Occ J:Mg302 b:67.8 occ:1.00 O1G J:AD9301 2.2 76.5 1.0 OG1 J:THR48 2.2 59.5 1.0 O2B J:AD9301 2.2 76.5 1.0 O3G J:AD9301 2.2 76.5 1.0 VG J:AD9301 2.6 76.5 1.0 CB J:THR48 2.9 59.5 1.0 PB J:AD9301 3.0 76.5 1.0 O3A J:AD9301 3.0 76.5 1.0 O3B J:AD9301 3.2 76.5 1.0 N J:THR48 3.8 59.5 1.0 CA J:THR48 3.9 59.5 1.0 O2G J:AD9301 4.0 76.5 1.0 CG2 J:THR48 4.0 59.5 1.0 PA J:AD9301 4.1 76.5 1.0 O1A J:AD9301 4.4 76.5 1.0 O2A J:AD9301 4.4 76.5 1.0 O1B J:AD9301 4.4 76.5 1.0 OD1 J:ASP169 4.5 41.7 1.0 NZ J:LYS47 4.8 64.1 1.0 CB J:LYS47 4.9 64.1 1.0 C J:LYS47 4.9 64.1 1.0 NE2 J:GLN92 5.0 36.6 1.0

C.Zhou, H.Shi, M.Zhang, L.Zhou, L.Xiao, S.Feng, W.Im, M.Zhou, X.Zhang, Y.Huang. Structural Insight Into Phospholipid Transport By the Mlafebd Complex From P. Aeruginosa. J.Mol.Biol. V. 433 66986 2021.
ISSN: ESSN 1089-8638
PubMed: 33845086
DOI: 10.1016/J.JMB.2021.166986