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Magnesium in PDB 7ct3: Crystal Structure of Mglc From Myxococcus Xanthus

Protein crystallography data

The structure of Crystal Structure of Mglc From Myxococcus Xanthus, PDB code: 7ct3 was solved by K.G.Thakur, S.Kapoor, A.Kodesia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.54 / 1.85
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 96.69, 96.69, 58.28, 90, 90, 120
R / Rfree (%) 15.8 / 21.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Mglc From Myxococcus Xanthus (pdb code 7ct3). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Mglc From Myxococcus Xanthus, PDB code: 7ct3:

Magnesium binding site 1 out of 1 in 7ct3

Go back to Magnesium Binding Sites List in 7ct3
Magnesium binding site 1 out of 1 in the Crystal Structure of Mglc From Myxococcus Xanthus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Mglc From Myxococcus Xanthus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg201

b:32.3
occ:1.00
O A:VAL69 2.1 26.3 1.0
O A:LEU64 2.2 26.6 1.0
O A:HOH354 2.4 33.9 1.0
O A:THR66 2.4 32.8 1.0
O A:HOH356 2.6 46.7 1.0
O A:HOH352 3.3 70.3 1.0
C A:LEU64 3.3 26.3 1.0
C A:VAL69 3.4 27.1 1.0
C A:THR66 3.6 32.5 1.0
O A:GLY67 3.9 38.1 1.0
CA A:LEU64 4.0 27.1 1.0
C A:GLY67 4.2 32.9 1.0
N A:VAL69 4.2 26.5 1.0
N A:THR66 4.2 30.4 1.0
CA A:VAL69 4.2 25.3 1.0
C A:LYS65 4.3 32.0 1.0
N A:LYS65 4.3 28.9 1.0
N A:SER70 4.4 25.8 1.0
CA A:GLY67 4.4 34.1 1.0
N A:GLY67 4.4 32.3 1.0
O A:HOH369 4.4 53.0 1.0
CD2 A:LEU85 4.5 32.2 1.0
CB A:VAL69 4.5 26.2 1.0
CA A:THR66 4.5 33.6 1.0
CA A:SER70 4.5 27.2 1.0
CA A:LYS65 4.6 32.0 1.0
CB A:LEU64 4.8 27.2 1.0
O A:LYS65 4.8 34.1 1.0
O A:THR63 4.8 24.9 1.0
N A:THR68 4.8 30.2 1.0
OG1 A:THR66 4.8 39.6 1.0
O A:HOH307 4.9 25.0 1.0
C A:THR68 4.9 27.8 1.0

Reference:

S.Kapoor, A.Kodesia, N.Kalidas, F.Ashish, K.G.Thakur. Structural Characterization of Myxococcus Xanthus Mglc, A Component of the Polarity Control System, and Its Interactions with Its Paralog Mglb. J.Biol.Chem. 2021.
ISSN: ESSN 1083-351X
Page generated: Wed Oct 2 14:19:52 2024

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