Atomistry » Magnesium » PDB 7e4f-7eg9 » 7ebm
Atomistry »
  Magnesium »
    PDB 7e4f-7eg9 »
      7ebm »

Magnesium in PDB 7ebm: W363A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi in Complex with Chitobiose.

Protein crystallography data

The structure of W363A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi in Complex with Chitobiose., PDB code: 7ebm was solved by Y.Kitaoku, P.Ubonbal, L.T.Tran, R.C.Robinson, W.Suginta, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.73 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 58.574, 55.986, 80.319, 90, 101.84, 90
R / Rfree (%) 18.3 / 24.9

Other elements in 7ebm:

The structure of W363A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi in Complex with Chitobiose. also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Calcium (Ca) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the W363A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi in Complex with Chitobiose. (pdb code 7ebm). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the W363A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi in Complex with Chitobiose., PDB code: 7ebm:

Magnesium binding site 1 out of 1 in 7ebm

Go back to Magnesium Binding Sites List in 7ebm
Magnesium binding site 1 out of 1 in the W363A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi in Complex with Chitobiose.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of W363A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi in Complex with Chitobiose. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg705

b:18.9
occ:1.00
O A:HOH970 2.1 25.4 1.0
O A:HOH863 2.1 27.1 1.0
O A:ALA188 2.3 18.9 1.0
O A:LEU191 2.4 24.9 1.0
C A:ALA188 3.4 20.8 1.0
C A:LEU191 3.6 21.5 1.0
N A:LEU191 4.2 18.6 1.0
CA A:ALA189 4.2 23.0 1.0
CA A:LEU191 4.3 20.0 1.0
N A:ALA189 4.3 19.6 1.0
O A:HOH897 4.3 25.2 1.0
C A:ALA189 4.4 21.0 1.0
CA A:ALA188 4.4 16.2 1.0
O A:ALA189 4.5 23.1 1.0
CB A:LEU191 4.5 11.8 1.0
OD1 A:ASP192 4.5 39.0 1.0
OE2 A:GLU181 4.6 33.4 1.0
CB A:ALA188 4.6 20.0 1.0
N A:ASP192 4.6 19.9 1.0
O A:HOH812 4.7 33.2 1.0
CA A:ASP192 4.9 19.7 1.0
N A:ASN190 4.9 18.7 1.0

Reference:

Y.Kitaoku, P.Ubonbal, L.T.Tran, R.C.Robinson, W.Suginta. Structural Insight Into Chitin-Specific Solute-Binding Protein From Vibrio Harveyi To Be Published.
Page generated: Thu Aug 14 06:48:57 2025

Last articles

Mn in 9LJU
Mn in 9LJW
Mn in 9LJS
Mn in 9LJR
Mn in 9LJT
Mn in 9LJV
Mg in 9UA2
Mg in 9R96
Mg in 9VM1
Mg in 9P01
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy