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Magnesium in PDB 7mqx: P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid
Enzymatic activity of P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid
All present enzymatic activity of P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid:
5.1.2.2;
5.1.2.2;
Protein crystallography data
The structure of P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid, PDB code: 7mqx
was solved by
L.Grandinetti,
S.L.Bearne,
M.St.Maurice,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 40.61 / 1.91 |
| Space group | C 1 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 225.483, 149.43, 149.523, 90, 129.34, 90 |
| R / Rfree (%) | 18.7 / 21.5 |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid
(pdb code 7mqx). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 8 binding sites of Magnesium where determined in the P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid, PDB code: 7mqx:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Magnesium where determined in the P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid, PDB code: 7mqx:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Magnesium binding site 1 out of 8 in 7mqx
Go back to
Magnesium Binding Sites List in 7mqx
Magnesium binding site 1 out
of 8 in the P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid within 5.0Å range:
|
Magnesium binding site 2 out of 8 in 7mqx
Go back to
Magnesium Binding Sites List in 7mqx
Magnesium binding site 2 out
of 8 in the P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid within 5.0Å range:
|
Magnesium binding site 3 out of 8 in 7mqx
Go back to
Magnesium Binding Sites List in 7mqx
Magnesium binding site 3 out
of 8 in the P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid within 5.0Å range:
|
Magnesium binding site 4 out of 8 in 7mqx
Go back to
Magnesium Binding Sites List in 7mqx
Magnesium binding site 4 out
of 8 in the P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid within 5.0Å range:
|
Magnesium binding site 5 out of 8 in 7mqx
Go back to
Magnesium Binding Sites List in 7mqx
Magnesium binding site 5 out
of 8 in the P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid within 5.0Å range:
|
Magnesium binding site 6 out of 8 in 7mqx
Go back to
Magnesium Binding Sites List in 7mqx
Magnesium binding site 6 out
of 8 in the P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid within 5.0Å range:
|
Magnesium binding site 7 out of 8 in 7mqx
Go back to
Magnesium Binding Sites List in 7mqx
Magnesium binding site 7 out
of 8 in the P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid within 5.0Å range:
|
Magnesium binding site 8 out of 8 in 7mqx
Go back to
Magnesium Binding Sites List in 7mqx
Magnesium binding site 8 out
of 8 in the P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of P. Putida Mandelate Racemase Forms An Oxobenzoxaborole Adduct with 2- Formylphenylboronic Acid within 5.0Å range:
|
Reference:
C.D.Douglas,
L.Grandinetti,
N.M.Easton,
O.P.Kuehm,
J.A.Hayden,
M.C.Hamilton,
S.L.Bearne.
Slow-Onset, Potent Inhibition of Mandelate Racemase By 2-Formylphenylboronic Acid. An Unexpected Adduct Clasps the Catalytic Machinery Biochemistry 2021.
ISSN: ISSN 0006-2960
DOI: 10.1021/ACS.BIOCHEM.1C00374
Page generated: Thu Oct 3 01:07:56 2024
ISSN: ISSN 0006-2960
DOI: 10.1021/ACS.BIOCHEM.1C00374
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