Magnesium in PDB 7n5a: Structure of ATATM3 in the Closed Conformation

The structure of Structure of ATATM3 in the Closed Conformation also contains other interesting chemical elements:

Vanadium

(V)

2 atoms

The binding sites of Magnesium atom in the Structure of ATATM3 in the Closed Conformation (pdb code 7n5a). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of ATATM3 in the Closed Conformation, PDB code: 7n5a:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of ATATM3 in the Closed Conformation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of ATATM3 in the Closed Conformation within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg803 b:49.0 occ:1.00 O4 B:VO4803 2.0 60.5 1.0 O3B B:ADP802 2.1 62.9 1.0 O1B B:ADP802 2.6 62.9 1.0 PB B:ADP802 2.7 62.9 1.0 V B:VO4803 3.1 60.5 1.0 O3A B:ADP802 3.1 62.9 1.0 O2 B:VO4803 3.2 60.5 1.0 N A:GLY618 3.4 49.2 1.0 OE1 B:GLN560 3.5 59.6 1.0 CB A:SER617 3.9 47.4 1.0 O3 B:VO4803 4.0 60.5 1.0 CA A:GLY618 4.1 49.2 1.0 O2B B:ADP802 4.1 62.9 1.0 CD B:GLN560 4.1 59.6 1.0 NE2 B:GLN560 4.3 59.6 1.0 CA A:SER617 4.3 47.4 1.0 C A:SER617 4.4 47.4 1.0 OG B:SER519 4.4 62.0 1.0 PA B:ADP802 4.5 62.9 1.0 OG A:SER617 4.5 47.4 1.0 CB B:SER519 4.5 62.0 1.0 N A:GLY619 4.7 48.5 1.0 O1 B:VO4803 4.7 60.5 1.0 O2A B:ADP802 4.8 62.9 1.0 O1A B:ADP802 4.9 62.9 1.0 C A:GLY618 5.0 49.2 1.0

Magnesium binding site 2 out of 2 in the Structure of ATATM3 in the Closed Conformation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of ATATM3 in the Closed Conformation within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg801 b:48.4 occ:1.00 O4 A:VO4802 2.0 59.5 1.0 O3B A:ADP801 2.1 63.1 1.0 O1B A:ADP801 2.6 63.1 1.0 PB A:ADP801 2.7 63.1 1.0 V A:VO4802 3.1 59.5 1.0 O3A A:ADP801 3.1 63.1 1.0 O2 A:VO4802 3.2 59.5 1.0 N B:GLY618 3.3 50.0 1.0 OE1 A:GLN560 3.5 60.2 1.0 CB B:SER617 3.8 48.0 1.0 O3 A:VO4802 4.0 59.5 1.0 CA B:GLY618 4.1 50.0 1.0 O2B A:ADP801 4.1 63.1 1.0 CD A:GLN560 4.1 60.2 1.0 CA B:SER617 4.2 48.0 1.0 NE2 A:GLN560 4.3 60.2 1.0 C B:SER617 4.3 48.0 1.0 OG A:SER519 4.4 62.6 1.0 PA A:ADP801 4.5 63.1 1.0 OG B:SER617 4.5 48.0 1.0 CB A:SER519 4.5 62.6 1.0 N B:GLY619 4.7 48.9 1.0 O1 A:VO4802 4.7 59.5 1.0 O2A A:ADP801 4.8 63.1 1.0 O1A A:ADP801 4.9 63.1 1.0 C B:GLY618 5.0 50.0 1.0

C.Fan, D.C.Rees. Glutathione Binding to the Plant at ATM3 Transporter and Implications For the Conformational Coupling of Abc Transporters. Elife V. 11 2022.
ISSN: ESSN 2050-084X
PubMed: 35333177
DOI: 10.7554/ELIFE.76140