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Magnesium in PDB 7p2y: F1FO-Atp Synthase From Acinetobacter Baumannii (State 1)

Enzymatic activity of F1FO-Atp Synthase From Acinetobacter Baumannii (State 1)

All present enzymatic activity of F1FO-Atp Synthase From Acinetobacter Baumannii (State 1):
7.1.2.2;

Magnesium Binding Sites:

The binding sites of Magnesium atom in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 1) (pdb code 7p2y). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 1), PDB code: 7p2y:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in 7p2y

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Magnesium binding site 1 out of 4 in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 1)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of F1FO-Atp Synthase From Acinetobacter Baumannii (State 1) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg602

b:93.0
occ:1.00
OG1 A:THR177 2.1 83.9 1.0
O2B A:ATP601 2.1 95.0 1.0
O A:HOH701 2.3 85.5 1.0
O2G A:ATP601 2.4 95.0 0.8
O3G A:ATP601 2.9 95.0 0.8
PG A:ATP601 3.0 95.0 0.8
CB A:THR177 3.2 83.9 1.0
PB A:ATP601 3.3 95.0 1.0
O3B A:ATP601 3.4 95.0 1.0
O1A A:ATP601 4.0 95.0 1.0
N A:THR177 4.1 83.9 1.0
CG2 A:THR177 4.2 83.9 1.0
O1B A:ATP601 4.2 95.0 1.0
CA A:THR177 4.2 83.9 1.0
O3A A:ATP601 4.4 95.0 1.0
O1G A:ATP601 4.5 95.0 0.8
NE2 A:GLN201 4.5 87.8 1.0
OD1 A:ASP262 4.7 81.3 1.0
OD2 A:ASP262 4.9 81.3 1.0
PA A:ATP601 4.9 95.0 1.0

Magnesium binding site 2 out of 4 in 7p2y

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Magnesium binding site 2 out of 4 in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 1)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of F1FO-Atp Synthase From Acinetobacter Baumannii (State 1) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg602

b:102.3
occ:1.00
OG1 B:THR177 2.1 91.8 1.0
O B:HOH701 2.3 98.8 1.0
O2G B:ATP601 2.3 110.9 1.0
O2B B:ATP601 2.4 110.9 1.0
PG B:ATP601 3.0 110.9 1.0
O3G B:ATP601 3.0 110.9 1.0
CB B:THR177 3.3 91.8 1.0
O3B B:ATP601 3.3 110.9 1.0
PB B:ATP601 3.4 110.9 1.0
CG2 B:THR177 4.2 91.8 1.0
N B:THR177 4.2 91.8 1.0
CA B:THR177 4.3 91.8 1.0
O1B B:ATP601 4.4 110.9 1.0
O1G B:ATP601 4.5 110.9 1.0
O3A B:ATP601 4.5 110.9 1.0
OD2 B:ASP262 4.7 83.6 1.0
O1A B:ATP601 4.7 110.9 1.0
O2A B:ATP601 5.0 110.9 1.0

Magnesium binding site 3 out of 4 in 7p2y

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Magnesium binding site 3 out of 4 in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 1)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of F1FO-Atp Synthase From Acinetobacter Baumannii (State 1) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg601

b:83.7
occ:1.00
OG1 C:THR177 2.1 79.3 1.0
O C:HOH701 2.2 81.7 1.0
O2B C:ATP602 2.3 86.3 1.0
O2G C:ATP602 2.4 86.3 0.8
PG C:ATP602 3.2 86.3 0.8
O1G C:ATP602 3.2 86.3 0.8
CB C:THR177 3.4 79.3 1.0
PB C:ATP602 3.4 86.3 1.0
O3B C:ATP602 3.5 86.3 1.0
N C:THR177 4.2 79.3 1.0
OE1 C:GLN201 4.2 84.3 1.0
CG2 C:THR177 4.3 79.3 1.0
CA C:THR177 4.3 79.3 1.0
O3A C:ATP602 4.4 86.3 1.0
OD2 C:ASP262 4.5 80.3 1.0
O1B C:ATP602 4.6 86.3 1.0
O3G C:ATP602 4.6 86.3 0.8
OD2 C:ASP263 4.7 84.6 1.0
OD1 C:ASP262 4.7 80.3 1.0

Magnesium binding site 4 out of 4 in 7p2y

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Magnesium binding site 4 out of 4 in the F1FO-Atp Synthase From Acinetobacter Baumannii (State 1)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of F1FO-Atp Synthase From Acinetobacter Baumannii (State 1) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg501

b:91.1
occ:1.00
O1B D:ADP502 2.1 94.0 1.0
O2B D:ADP502 2.2 94.0 1.0
PB D:ADP502 2.6 94.0 1.0
O3A D:ADP502 3.7 94.0 1.0
O3B D:ADP502 3.8 94.0 1.0
NH1 D:ARG181 4.0 83.9 1.0
NH1 A:ARG377 4.1 89.6 1.0
NZ D:LYS154 4.2 80.3 1.0
CE D:LYS154 4.3 80.3 1.0
OG1 D:THR155 4.4 83.0 1.0
NH2 D:ARG181 4.5 83.9 1.0
N D:GLY151 4.5 83.1 1.0
ND2 D:ASN248 4.6 80.3 1.0
OE1 D:GLU180 4.7 85.0 1.0
CZ D:ARG181 4.7 83.9 1.0

Reference:

J.K.Demmer, B.P.Phillips, O.L.Uhrig, A.Filloux, L.P.Allsopp, M.Bublitz, T.Meier. Structure of Atp Synthase From Eskape Pathogen Acinetobacter Baumannii. Sci Adv V. 8 L5966 2022.
ISSN: ESSN 2375-2548
PubMed: 35171679
DOI: 10.1126/SCIADV.ABL5966
Page generated: Thu Oct 3 04:00:02 2024

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