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Magnesium in PDB 7qpl: Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with Phosphate and Magnesium

Enzymatic activity of Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with Phosphate and Magnesium

All present enzymatic activity of Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with Phosphate and Magnesium:
3.1.3.3;

Protein crystallography data

The structure of Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with Phosphate and Magnesium, PDB code: 7qpl was solved by E.Pierson, J.Wouters, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.27 / 1.77
Space group I 21 3
Cell size a, b, c (Å), α, β, γ (°) 143.21, 143.21, 143.21, 90, 90, 90
R / Rfree (%) 15.8 / 18.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with Phosphate and Magnesium (pdb code 7qpl). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with Phosphate and Magnesium, PDB code: 7qpl:

Magnesium binding site 1 out of 1 in 7qpl

Go back to Magnesium Binding Sites List in 7qpl
Magnesium binding site 1 out of 1 in the Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with Phosphate and Magnesium


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with Phosphate and Magnesium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg415

b:33.9
occ:1.00
 OD2 A:ASP94 2.0 39.5 1.0
O3 A:PO4416 2.0 38.6 1.0
O A:HOH559 2.1 36.8 1.0
O A:HOH528 2.1 33.8 1.0
OD1 A:ASP251 2.1 35.4 1.0
O A:ASP96 2.2 35.9 1.0
CG A:ASP94 3.1 36.9 1.0
CG A:ASP251 3.1 39.6 1.0
C A:ASP96 3.3 37.0 1.0
P A:PO4416 3.4 38.3 1.0
OD2 A:ASP251 3.5 40.2 1.0
OD1 A:ASP94 3.7 39.0 1.0
O4 A:PO4416 3.9 36.9 1.0
O A:HOH727 3.9 44.4 1.0
OD2 A:ASP255 4.0 34.7 1.0
CA A:ASP96 4.0 37.9 1.0
CB A:ASP96 4.1 36.1 1.0
N A:ASP96 4.1 33.2 1.0
OG1 A:THR98 4.1 34.0 1.0
OE2 A:GLU103 4.2 41.5 1.0
O2 A:PO4416 4.2 39.0 1.0
O A:HOH572 4.2 46.3 1.0
CB A:ASP94 4.3 36.0 1.0
N A:SER97 4.4 35.0 1.0
CB A:SER97 4.5 39.1 1.0
CB A:ASP251 4.5 35.5 1.0
O1 A:PO4416 4.5 37.4 1.0
N A:GLY252 4.7 34.3 1.0
N A:ASP251 4.7 32.4 1.0
CA A:SER97 4.8 40.5 1.0
N A:THR98 4.8 37.9 1.0
C A:SER97 4.8 45.8 1.0
C A:MET95 4.8 38.8 1.0
OD1 A:ASN254 4.9 49.6 1.0
CG A:ASP255 4.9 34.9 1.0
CB A:THR98 4.9 34.1 1.0

Reference:

E.Pierson, J.Wouters. Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with Phosphate and Magnesium To Be Published.
Page generated: Thu Aug 14 14:10:47 2025

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