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Magnesium in PDB 7riy: Rna Polymerase II Elongation Complex with Hairpin Polyamide Py-Im 1, Scaffold 2 Soaked with Utp
Enzymatic activity of Rna Polymerase II Elongation Complex with Hairpin Polyamide Py-Im 1, Scaffold 2 Soaked with Utp
All present enzymatic activity of Rna Polymerase II Elongation Complex with Hairpin Polyamide Py-Im 1, Scaffold 2 Soaked with Utp:
2.7.7.6;
2.7.7.6;
Protein crystallography data
The structure of Rna Polymerase II Elongation Complex with Hairpin Polyamide Py-Im 1, Scaffold 2 Soaked with Utp, PDB code: 7riy
was solved by
J.Oh,
P.B.Dervan,
D.Wang,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 49.53 / 3.70 |
| Space group | C 1 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 167.775, 222.76, 192.956, 90, 100.54, 90 |
| R / Rfree (%) | 23.2 / 28.1 |
Other elements in 7riy:
The structure of Rna Polymerase II Elongation Complex with Hairpin Polyamide Py-Im 1, Scaffold 2 Soaked with Utp also contains other interesting chemical elements:
| Zinc | (Zn) | 8 atoms |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Rna Polymerase II Elongation Complex with Hairpin Polyamide Py-Im 1, Scaffold 2 Soaked with Utp
(pdb code 7riy). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Rna Polymerase II Elongation Complex with Hairpin Polyamide Py-Im 1, Scaffold 2 Soaked with Utp, PDB code: 7riy:
In total only one binding site of Magnesium was determined in the Rna Polymerase II Elongation Complex with Hairpin Polyamide Py-Im 1, Scaffold 2 Soaked with Utp, PDB code: 7riy:
Magnesium binding site 1 out of 1 in 7riy
Go back to
Magnesium Binding Sites List in 7riy
Magnesium binding site 1 out
of 1 in the Rna Polymerase II Elongation Complex with Hairpin Polyamide Py-Im 1, Scaffold 2 Soaked with Utp
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Rna Polymerase II Elongation Complex with Hairpin Polyamide Py-Im 1, Scaffold 2 Soaked with Utp within 5.0Å range:
|
Reference:
J.Oh,
T.Jia,
J.Xu,
J.Chong,
P.B.Dervan,
D.Wang.
Rna Polymerase II Trapped on A Molecular Treadmill: Structural Basis of Persistent Transcriptional Arrest By A Minor Groove Dna Binder. Proc.Natl.Acad.Sci.Usa V. 119 2022.
ISSN: ESSN 1091-6490
PubMed: 35022237
DOI: 10.1073/PNAS.2114065119
Page generated: Thu Aug 14 15:06:25 2025
ISSN: ESSN 1091-6490
PubMed: 35022237
DOI: 10.1073/PNAS.2114065119
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