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Magnesium in PDB 7uex: PANK3 Complex Structure with Compound Pz-4127

Enzymatic activity of PANK3 Complex Structure with Compound Pz-4127

All present enzymatic activity of PANK3 Complex Structure with Compound Pz-4127:
2.7.1.33;

Protein crystallography data

The structure of PANK3 Complex Structure with Compound Pz-4127, PDB code: 7uex was solved by S.W.White, M.Yun, R.E.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.95 / 1.90
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 97.907, 97.907, 68.907, 90, 90, 120
R / Rfree (%) 18 / 21.1

Other elements in 7uex:

The structure of PANK3 Complex Structure with Compound Pz-4127 also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the PANK3 Complex Structure with Compound Pz-4127 (pdb code 7uex). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the PANK3 Complex Structure with Compound Pz-4127, PDB code: 7uex:

Magnesium binding site 1 out of 1 in 7uex

Go back to Magnesium Binding Sites List in 7uex
Magnesium binding site 1 out of 1 in the PANK3 Complex Structure with Compound Pz-4127


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of PANK3 Complex Structure with Compound Pz-4127 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg407

b:48.5
occ:1.00
O3G A:ANP403 2.1 47.5 1.0
O A:HOH507 2.1 39.6 1.0
O1B A:ANP403 2.1 43.4 1.0
O A:HOH532 2.2 45.3 1.0
O A:HOH544 2.3 36.0 1.0
O A:HOH537 2.4 27.2 1.0
PB A:ANP403 3.4 30.6 1.0
PG A:ANP403 3.5 34.8 1.0
O3A A:ANP403 3.7 26.8 1.0
O A:HOH513 4.0 32.1 1.0
N3B A:ANP403 4.0 50.2 1.0
NZ A:LYS24 4.1 22.3 1.0
O2A A:ANP403 4.1 21.8 1.0
OE2 A:GLU138 4.1 75.2 1.0
O A:HOH528 4.1 43.3 1.0
OD2 A:ASP17 4.2 24.7 1.0
O2G A:ANP403 4.3 31.3 1.0
O A:HOH560 4.3 32.1 1.0
ND2 A:ASN189 4.4 27.6 1.0
PA A:ANP403 4.5 23.2 1.0
OD1 A:ASP17 4.5 27.4 1.0
O1G A:ANP403 4.5 38.6 1.0
CH3 A:ACT401 4.6 36.4 1.0
O2B A:ANP403 4.6 25.9 1.0
CA A:GLY19 4.6 28.1 1.0
CG A:ASP17 4.7 29.4 1.0
CE A:LYS24 4.8 25.8 1.0
O A:HOH601 4.9 43.7 1.0
OD1 A:ASN189 4.9 28.6 1.0
O1A A:ANP403 5.0 22.2 1.0

Reference:

R.Tangallapally, A.Edwards, C.Subramanian, L.K.Sharma, M.Yun, S.W.White, S.Jackowski, C.O.Rock, R.E.Lee. Discovery of Hpank Activators with Improved Pharmacological Properties To Be Published.
Page generated: Thu Oct 3 10:00:08 2024

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