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Magnesium in PDB 7vls: Structure of SUR2B in Complex with Mgatp/Adp and P1075

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of SUR2B in Complex with Mgatp/Adp and P1075 (pdb code 7vls). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of SUR2B in Complex with Mgatp/Adp and P1075, PDB code: 7vls:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7vls

Go back to Magnesium Binding Sites List in 7vls
Magnesium binding site 1 out of 2 in the Structure of SUR2B in Complex with Mgatp/Adp and P1075


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of SUR2B in Complex with Mgatp/Adp and P1075 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1603

b:107.9
occ:1.00
OE1 A:GLN753 1.9 77.7 1.0
OG A:SER708 2.3 69.7 1.0
O3G A:ATP1605 2.6 67.1 1.0
CD A:GLN753 2.8 69.6 1.0
O1B A:ATP1605 3.1 67.1 1.0
NE2 A:GLN753 3.2 77.2 1.0
OD1 A:ASP832 3.3 61.1 1.0
O3B A:ATP1605 3.5 67.1 1.0
PG A:ATP1605 3.6 67.1 1.0
CB A:SER708 3.7 60.2 1.0
O2G A:ATP1605 3.9 67.1 1.0
PB A:ATP1605 3.9 67.1 1.0
CG A:GLN753 4.0 54.0 1.0
CG A:ASP832 4.0 68.8 1.0
OD2 A:ASP832 4.1 80.6 1.0
CB A:GLN753 4.2 47.2 1.0
N A:SER708 4.5 50.5 1.0
CG1 A:VAL865 4.5 61.8 1.0
CA A:SER708 4.6 43.8 1.0
O1G A:ATP1605 4.9 67.1 1.0
O3A A:ATP1605 5.0 67.1 1.0

Magnesium binding site 2 out of 2 in 7vls

Go back to Magnesium Binding Sites List in 7vls
Magnesium binding site 2 out of 2 in the Structure of SUR2B in Complex with Mgatp/Adp and P1075


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of SUR2B in Complex with Mgatp/Adp and P1075 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1604

b:117.5
occ:1.00
O1B A:ADP1602 2.1 94.5 1.0
OG A:SER1349 2.2 73.0 1.0
OE1 A:GLU1470 3.3 83.8 1.0
PB A:ADP1602 3.3 94.5 1.0
CB A:SER1349 3.3 79.6 1.0
O2B A:ADP1602 3.8 94.5 1.0
O3B A:ADP1602 4.0 94.5 1.0
OE1 A:GLN1390 4.2 79.4 1.0
O1A A:ADP1602 4.3 94.5 1.0
OD1 A:ASP1469 4.3 81.4 1.0
CD A:GLU1470 4.3 82.4 1.0
N A:SER1349 4.4 79.0 1.0
OD2 A:ASP1469 4.4 95.8 1.0
CA A:SER1349 4.4 74.0 1.0
O3A A:ADP1602 4.6 94.5 1.0
OE2 A:GLU1470 4.6 80.4 1.0
CG A:ASP1469 4.8 83.3 1.0
PA A:ADP1602 4.9 94.5 1.0

Reference:

D.Ding, J.X.Wu, X.Duan, S.Ma, L.Lai, L.Chen. Structural Identification of Vasodilator Binding Sites on the SUR2 Subunit. Nat Commun V. 13 2675 2022.
ISSN: ESSN 2041-1723
PubMed: 35562524
DOI: 10.1038/S41467-022-30428-Y
Page generated: Thu Oct 3 10:31:53 2024

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