Magnesium in PDB 7w4p: The Structure of Katp H175K Mutant in Closed State

The structure of The Structure of Katp H175K Mutant in Closed State also contains other interesting chemical elements:

Chlorine

(Cl)

4 atoms

The binding sites of Magnesium atom in the The Structure of Katp H175K Mutant in Closed State (pdb code 7w4p). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 8 binding sites of Magnesium where determined in the The Structure of Katp H175K Mutant in Closed State, PDB code: 7w4p:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Magnesium binding site 1 out of 8 in the The Structure of Katp H175K Mutant in Closed State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Structure of Katp H175K Mutant in Closed State within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg1602 b:42.3 occ:1.00 OE1 B:GLN775 2.2 41.4 1.0 O1B B:ATP1605 2.2 42.4 1.0 CB B:SER720 2.7 46.0 1.0 OD2 B:ASP854 3.0 63.9 1.0 CD B:GLN775 3.1 48.9 1.0 OD1 B:ASP854 3.2 55.9 1.0 CG B:ASP854 3.5 56.6 1.0 OG B:SER720 3.6 48.6 1.0 PB B:ATP1605 3.6 41.7 1.0 NE2 B:GLN775 3.7 48.0 1.0 O2G B:ATP1605 3.8 45.4 1.0 CA B:SER720 3.8 40.2 1.0 N B:SER720 3.8 40.1 1.0 O3B B:ATP1605 4.0 42.9 1.0 CG B:GLN775 4.2 43.0 1.0 CB B:GLN775 4.2 38.6 1.0 O3A B:ATP1605 4.3 44.5 1.0 PG B:ATP1605 4.4 44.6 1.0 O1A B:ATP1605 4.6 40.9 1.0 O2B B:ATP1605 4.8 39.3 1.0 O1G B:ATP1605 4.8 45.7 1.0 PA B:ATP1605 4.9 49.1 1.0 CB B:ASP854 5.0 47.9 1.0 C B:LYS719 5.0 42.0 1.0

Magnesium binding site 2 out of 8 in the The Structure of Katp H175K Mutant in Closed State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of The Structure of Katp H175K Mutant in Closed State within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg1603 b:34.2 occ:1.00 O2B B:ADP1601 2.5 37.2 1.0 O3B B:ADP1601 2.9 54.4 1.0 PB B:ADP1601 3.2 53.0 1.0 CB B:SER1386 3.4 40.5 1.0 OE1 B:GLU1507 3.7 60.2 1.0 OG B:SER1386 4.2 45.3 1.0 O1B B:ADP1601 4.2 44.1 1.0 O2A B:ADP1601 4.3 36.0 1.0 O3A B:ADP1601 4.4 43.4 1.0 CD B:GLU1507 4.5 63.1 1.0 CA B:SER1386 4.6 40.5 1.0 N B:SER1386 4.6 36.9 1.0 PA B:ADP1601 4.7 43.3 1.0 NE2 B:GLN1427 4.7 57.2 1.0 OE2 B:GLU1507 4.8 72.1 1.0 O1A B:ADP1601 4.9 40.2 1.0 OD1 B:ASP1506 4.9 50.4 1.0 NZ B:LYS1385 5.0 45.7 1.0

Magnesium binding site 3 out of 8 in the The Structure of Katp H175K Mutant in Closed State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of The Structure of Katp H175K Mutant in Closed State within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg1602 b:42.3 occ:1.00 OE1 D:GLN775 2.2 41.4 1.0 O1B D:ATP1605 2.2 42.4 1.0 CB D:SER720 2.7 46.0 1.0 OD2 D:ASP854 3.0 63.9 1.0 CD D:GLN775 3.1 48.9 1.0 OD1 D:ASP854 3.2 55.9 1.0 CG D:ASP854 3.5 56.6 1.0 OG D:SER720 3.6 48.6 1.0 PB D:ATP1605 3.6 41.7 1.0 NE2 D:GLN775 3.7 48.0 1.0 O2G D:ATP1605 3.8 45.4 1.0 CA D:SER720 3.8 40.2 1.0 N D:SER720 3.8 40.1 1.0 O3B D:ATP1605 4.0 42.9 1.0 CG D:GLN775 4.2 43.0 1.0 CB D:GLN775 4.2 38.6 1.0 O3A D:ATP1605 4.3 44.5 1.0 PG D:ATP1605 4.4 44.6 1.0 O1A D:ATP1605 4.6 40.9 1.0 O2B D:ATP1605 4.8 39.3 1.0 O1G D:ATP1605 4.8 45.7 1.0 PA D:ATP1605 4.9 49.1 1.0 CB D:ASP854 5.0 47.9 1.0 C D:LYS719 5.0 42.0 1.0

Magnesium binding site 4 out of 8 in the The Structure of Katp H175K Mutant in Closed State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of The Structure of Katp H175K Mutant in Closed State within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg1603 b:34.2 occ:1.00 O2B D:ADP1601 2.5 37.2 1.0 O3B D:ADP1601 2.9 54.4 1.0 PB D:ADP1601 3.2 53.0 1.0 CB D:SER1386 3.4 40.5 1.0 OE1 D:GLU1507 3.7 60.2 1.0 OG D:SER1386 4.2 45.3 1.0 O1B D:ADP1601 4.2 44.1 1.0 O2A D:ADP1601 4.3 36.0 1.0 O3A D:ADP1601 4.4 43.4 1.0 CD D:GLU1507 4.5 63.1 1.0 CA D:SER1386 4.6 40.5 1.0 N D:SER1386 4.6 36.9 1.0 PA D:ADP1601 4.7 43.3 1.0 NE2 D:GLN1427 4.7 57.2 1.0 OE2 D:GLU1507 4.8 72.1 1.0 O1A D:ADP1601 4.9 40.2 1.0 OD1 D:ASP1506 4.9 50.4 1.0 NZ D:LYS1385 5.0 45.7 1.0

Magnesium binding site 5 out of 8 in the The Structure of Katp H175K Mutant in Closed State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of The Structure of Katp H175K Mutant in Closed State within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg1602 b:42.3 occ:1.00 OE1 F:GLN775 2.2 41.4 1.0 O1B F:ATP1605 2.2 42.4 1.0 CB F:SER720 2.7 46.0 1.0 OD2 F:ASP854 3.0 63.9 1.0 CD F:GLN775 3.1 48.9 1.0 OD1 F:ASP854 3.2 55.9 1.0 CG F:ASP854 3.5 56.6 1.0 OG F:SER720 3.6 48.6 1.0 PB F:ATP1605 3.6 41.7 1.0 NE2 F:GLN775 3.7 48.0 1.0 O2G F:ATP1605 3.8 45.4 1.0 CA F:SER720 3.8 40.2 1.0 N F:SER720 3.8 40.1 1.0 O3B F:ATP1605 4.0 42.9 1.0 CG F:GLN775 4.2 43.0 1.0 CB F:GLN775 4.2 38.6 1.0 O3A F:ATP1605 4.3 44.5 1.0 PG F:ATP1605 4.4 44.6 1.0 O1A F:ATP1605 4.6 40.9 1.0 O2B F:ATP1605 4.8 39.3 1.0 O1G F:ATP1605 4.8 45.7 1.0 PA F:ATP1605 4.9 49.1 1.0 CB F:ASP854 5.0 47.9 1.0 C F:LYS719 5.0 42.0 1.0

Magnesium binding site 6 out of 8 in the The Structure of Katp H175K Mutant in Closed State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of The Structure of Katp H175K Mutant in Closed State within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg1603 b:34.2 occ:1.00 O2B F:ADP1601 2.5 37.2 1.0 O3B F:ADP1601 2.9 54.4 1.0 PB F:ADP1601 3.2 53.0 1.0 CB F:SER1386 3.4 40.5 1.0 OE1 F:GLU1507 3.7 60.2 1.0 OG F:SER1386 4.2 45.3 1.0 O1B F:ADP1601 4.2 44.1 1.0 O2A F:ADP1601 4.3 36.0 1.0 O3A F:ADP1601 4.4 43.4 1.0 CD F:GLU1507 4.5 63.1 1.0 CA F:SER1386 4.6 40.5 1.0 N F:SER1386 4.6 36.9 1.0 PA F:ADP1601 4.7 43.3 1.0 NE2 F:GLN1427 4.7 57.2 1.0 OE2 F:GLU1507 4.8 72.1 1.0 O1A F:ADP1601 4.9 40.2 1.0 OD1 F:ASP1506 4.9 50.4 1.0 NZ F:LYS1385 5.0 45.7 1.0

Magnesium binding site 7 out of 8 in the The Structure of Katp H175K Mutant in Closed State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of The Structure of Katp H175K Mutant in Closed State within 5.0Å range: probe atom residue distance (Å) B Occ H:Mg1602 b:42.3 occ:1.00 OE1 H:GLN775 2.2 41.4 1.0 O1B H:ATP1605 2.2 42.4 1.0 CB H:SER720 2.7 46.0 1.0 OD2 H:ASP854 3.0 63.9 1.0 CD H:GLN775 3.1 48.9 1.0 OD1 H:ASP854 3.2 55.9 1.0 CG H:ASP854 3.5 56.6 1.0 OG H:SER720 3.6 48.6 1.0 PB H:ATP1605 3.6 41.7 1.0 NE2 H:GLN775 3.7 48.0 1.0 O2G H:ATP1605 3.8 45.4 1.0 CA H:SER720 3.8 40.2 1.0 N H:SER720 3.8 40.1 1.0 O3B H:ATP1605 4.0 42.9 1.0 CG H:GLN775 4.2 43.0 1.0 CB H:GLN775 4.2 38.6 1.0 O3A H:ATP1605 4.3 44.5 1.0 PG H:ATP1605 4.4 44.6 1.0 O1A H:ATP1605 4.6 40.9 1.0 O2B H:ATP1605 4.8 39.3 1.0 O1G H:ATP1605 4.8 45.7 1.0 PA H:ATP1605 4.9 49.1 1.0 CB H:ASP854 5.0 47.9 1.0 C H:LYS719 5.0 42.0 1.0

Magnesium binding site 8 out of 8 in the The Structure of Katp H175K Mutant in Closed State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of The Structure of Katp H175K Mutant in Closed State within 5.0Å range: probe atom residue distance (Å) B Occ H:Mg1603 b:34.2 occ:1.00 O2B H:ADP1601 2.5 37.2 1.0 O3B H:ADP1601 2.9 54.4 1.0 PB H:ADP1601 3.2 53.0 1.0 CB H:SER1386 3.4 40.5 1.0 OE1 H:GLU1507 3.7 60.2 1.0 OG H:SER1386 4.2 45.3 1.0 O1B H:ADP1601 4.2 44.1 1.0 O2A H:ADP1601 4.3 36.0 1.0 O3A H:ADP1601 4.4 43.4 1.0 CD H:GLU1507 4.5 63.1 1.0 CA H:SER1386 4.6 40.5 1.0 N H:SER1386 4.6 36.9 1.0 PA H:ADP1601 4.7 43.3 1.0 NE2 H:GLN1427 4.7 57.2 1.0 OE2 H:GLU1507 4.8 72.1 1.0 O1A H:ADP1601 4.9 40.2 1.0 OD1 H:ASP1506 4.9 50.4 1.0 NZ H:LYS1385 5.0 45.7 1.0

M.Wang, J.X.Wu, D.Ding, L.Chen. Structural Insights Into the Mechanism of Pancreatic K Atp Channel Regulation By Nucleotides. Nat Commun V. 13 2770 2022.
ISSN: ESSN 2041-1723
PubMed: 35589716
DOI: 10.1038/S41467-022-30430-4