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Magnesium in PDB 7wyi: Native Photosystem I of Chlamydomonas Reinhardtii

Enzymatic activity of Native Photosystem I of Chlamydomonas Reinhardtii

All present enzymatic activity of Native Photosystem I of Chlamydomonas Reinhardtii:
1.97.1.12;

Other elements in 7wyi:

The structure of Native Photosystem I of Chlamydomonas Reinhardtii also contains other interesting chemical elements:

Iron (Fe) 12 atoms

Magnesium Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 50; Page 6, Binding sites: 51 - 60; Page 7, Binding sites: 61 - 70; Page 8, Binding sites: 71 - 80; Page 9, Binding sites: 81 - 90; Page 10, Binding sites: 91 - 100; Page 11, Binding sites: 101 - 110; Page 12, Binding sites: 111 - 120; Page 13, Binding sites: 121 - 130; Page 14, Binding sites: 131 - 140; Page 15, Binding sites: 141 - 150; Page 16, Binding sites: 151 - 160; Page 17, Binding sites: 161 - 166;

Binding sites:

The binding sites of Magnesium atom in the Native Photosystem I of Chlamydomonas Reinhardtii (pdb code 7wyi). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 166 binding sites of Magnesium where determined in the Native Photosystem I of Chlamydomonas Reinhardtii, PDB code: 7wyi:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 166 in 7wyi

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Magnesium binding site 1 out of 166 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg801

b:156.6
occ:1.00
MG A:CL0801 0.0 156.6 1.0
NB A:CL0801 1.9 156.6 1.0
ND A:CL0801 1.9 156.6 1.0
NA A:CL0801 1.9 156.6 1.0
NC A:CL0801 2.0 156.6 1.0
C4D A:CL0801 2.9 156.6 1.0
C1C A:CL0801 3.0 156.6 1.0
C4A A:CL0801 3.0 156.6 1.0
C1A A:CL0801 3.0 156.6 1.0
C1B A:CL0801 3.0 156.6 1.0
C4B A:CL0801 3.0 156.6 1.0
CAB B:CLA804 3.1 149.6 1.0
C1D A:CL0801 3.1 156.6 1.0
C4C A:CL0801 3.1 156.6 1.0
CBB B:CLA804 3.1 149.6 1.0
C3B B:CLA804 3.3 149.6 1.0
CHB A:CL0801 3.3 156.6 1.0
CHA A:CL0801 3.4 156.6 1.0
CHC A:CL0801 3.4 156.6 1.0
C4B B:CLA804 3.5 149.6 1.0
CHC B:CLA804 3.5 149.6 1.0
CHD A:CL0801 3.5 156.6 1.0
C3D A:CL0801 4.1 156.6 1.0
C2B A:CL0801 4.2 156.6 1.0
C3B A:CL0801 4.2 156.6 1.0
C2C A:CL0801 4.2 156.6 1.0
C2D A:CL0801 4.2 156.6 1.0
C3A A:CL0801 4.3 156.6 1.0
C1C B:CLA804 4.3 149.6 1.0
C3C A:CL0801 4.3 156.6 1.0
C2B B:CLA804 4.3 149.6 1.0
C2A A:CL0801 4.3 156.6 1.0
NB B:CLA804 4.4 149.6 1.0
CBD A:CL0801 4.8 156.6 1.0
CMC B:CLA804 4.9 149.6 1.0
C2C B:CLA804 4.9 149.6 1.0
C1B B:CLA804 5.0 149.6 1.0

Magnesium binding site 2 out of 166 in 7wyi

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Magnesium binding site 2 out of 166 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg802

b:135.8
occ:1.00
MG A:CLA802 0.0 135.8 1.0
NA A:CLA802 1.9 135.8 1.0
NB A:CLA802 1.9 135.8 1.0
ND A:CLA802 1.9 135.8 1.0
NC A:CLA802 1.9 135.8 1.0
C4D A:CLA802 2.9 135.8 1.0
C1A A:CLA802 3.0 135.8 1.0
C1C A:CLA802 3.0 135.8 1.0
C4A A:CLA802 3.0 135.8 1.0
C1B A:CLA802 3.0 135.8 1.0
C4B A:CLA802 3.0 135.8 1.0
C4C A:CLA802 3.1 135.8 1.0
C1D A:CLA802 3.1 135.8 1.0
CHA A:CLA802 3.3 135.8 1.0
CHB A:CLA802 3.4 135.8 1.0
CHC A:CLA802 3.4 135.8 1.0
CHD A:CLA802 3.5 135.8 1.0
C3D A:CLA802 4.1 135.8 1.0
C2B A:CLA802 4.2 135.8 1.0
C3B A:CLA802 4.2 135.8 1.0
C2A A:CLA802 4.2 135.8 1.0
C2D A:CLA802 4.2 135.8 1.0
C2C A:CLA802 4.2 135.8 1.0
C3A A:CLA802 4.2 135.8 1.0
C3C A:CLA802 4.3 135.8 1.0
CB A:MET684 4.3 120.1 1.0
CMC A:CLA842 4.4 158.4 1.0
CAA A:CLA802 4.5 135.8 1.0
CBD A:CLA802 4.8 135.8 1.0
CMA A:CLA802 5.0 135.8 1.0
CHC A:CLA842 5.0 158.4 1.0
CAB A:CLA842 5.0 158.4 1.0

Magnesium binding site 3 out of 166 in 7wyi

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Magnesium binding site 3 out of 166 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg803

b:148.2
occ:1.00
MG A:CLA803 0.0 148.2 1.0
NB A:CLA803 1.9 148.2 1.0
ND A:CLA803 1.9 148.2 1.0
NA A:CLA803 2.0 148.2 1.0
NC A:CLA803 2.0 148.2 1.0
C4D A:CLA803 2.9 148.2 1.0
C4A A:CLA803 3.0 148.2 1.0
C1C A:CLA803 3.0 148.2 1.0
C1A A:CLA803 3.0 148.2 1.0
C1B A:CLA803 3.0 148.2 1.0
C4B A:CLA803 3.0 148.2 1.0
C1D A:CLA803 3.1 148.2 1.0
C4C A:CLA803 3.1 148.2 1.0
CHA A:CLA803 3.3 148.2 1.0
CHB A:CLA803 3.4 148.2 1.0
CHC A:CLA803 3.4 148.2 1.0
CHD A:CLA803 3.5 148.2 1.0
C3D A:CLA803 4.1 148.2 1.0
C2B A:CLA803 4.2 148.2 1.0
C2D A:CLA803 4.2 148.2 1.0
C3B A:CLA803 4.2 148.2 1.0
C2C A:CLA803 4.3 148.2 1.0
C3A A:CLA803 4.3 148.2 1.0
C3C A:CLA803 4.3 148.2 1.0
C2A A:CLA803 4.3 148.2 1.0
CBB J:CLA101 4.4 145.8 1.0
CBA A:CLA803 4.8 148.2 1.0
CBD A:CLA803 4.8 148.2 1.0

Magnesium binding site 4 out of 166 in 7wyi

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Magnesium binding site 4 out of 166 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg804

b:139.6
occ:1.00
MG A:CLA804 0.0 139.6 1.0
NB A:CLA804 1.9 139.6 1.0
NA A:CLA804 1.9 139.6 1.0
ND A:CLA804 1.9 139.6 1.0
NC A:CLA804 1.9 139.6 1.0
C4D A:CLA804 2.9 139.6 1.0
C1A A:CLA804 2.9 139.6 1.0
C1C A:CLA804 3.0 139.6 1.0
C4A A:CLA804 3.0 139.6 1.0
C1B A:CLA804 3.0 139.6 1.0
C4B A:CLA804 3.0 139.6 1.0
C4C A:CLA804 3.1 139.6 1.0
C1D A:CLA804 3.1 139.6 1.0
CHA A:CLA804 3.3 139.6 1.0
CHC A:CLA804 3.4 139.6 1.0
CHB A:CLA804 3.4 139.6 1.0
CHD A:CLA804 3.5 139.6 1.0
CMB A:CLA828 3.6 140.0 1.0
C3D A:CLA804 4.1 139.6 1.0
C2B A:CLA804 4.1 139.6 1.0
C3B A:CLA804 4.2 139.6 1.0
C2A A:CLA804 4.2 139.6 1.0
C2D A:CLA804 4.2 139.6 1.0
C2C A:CLA804 4.2 139.6 1.0
C3A A:CLA804 4.2 139.6 1.0
C3C A:CLA804 4.3 139.6 1.0
CAA A:CLA804 4.6 139.6 1.0
CBD A:CLA804 4.8 139.6 1.0
CMA A:CLA804 4.8 139.6 1.0

Magnesium binding site 5 out of 166 in 7wyi

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Magnesium binding site 5 out of 166 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg805

b:140.8
occ:1.00
MG A:CLA805 0.0 140.8 1.0
NB A:CLA805 1.9 140.8 1.0
ND A:CLA805 1.9 140.8 1.0
NA A:CLA805 1.9 140.8 1.0
NC A:CLA805 2.0 140.8 1.0
C4D A:CLA805 2.9 140.8 1.0
C4A A:CLA805 3.0 140.8 1.0
C1A A:CLA805 3.0 140.8 1.0
C1C A:CLA805 3.0 140.8 1.0
C1B A:CLA805 3.0 140.8 1.0
C4B A:CLA805 3.0 140.8 1.0
C4C A:CLA805 3.1 140.8 1.0
C1D A:CLA805 3.1 140.8 1.0
CHA A:CLA805 3.3 140.8 1.0
CHB A:CLA805 3.4 140.8 1.0
CHC A:CLA805 3.4 140.8 1.0
CHD A:CLA805 3.5 140.8 1.0
C3D A:CLA805 4.1 140.8 1.0
C2B A:CLA805 4.2 140.8 1.0
C3B A:CLA805 4.2 140.8 1.0
C2D A:CLA805 4.2 140.8 1.0
C2C A:CLA805 4.3 140.8 1.0
C2A A:CLA805 4.3 140.8 1.0
C3A A:CLA805 4.3 140.8 1.0
C3C A:CLA805 4.3 140.8 1.0
CBD A:CLA805 4.8 140.8 1.0
CAA A:CLA805 4.9 140.8 1.0

Magnesium binding site 6 out of 166 in 7wyi

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Magnesium binding site 6 out of 166 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg806

b:154.7
occ:1.00
MG A:CLA806 0.0 154.7 1.0
ND A:CLA806 1.9 154.7 1.0
NB A:CLA806 1.9 154.7 1.0
NA A:CLA806 1.9 154.7 1.0
NC A:CLA806 2.0 154.7 1.0
C4D A:CLA806 2.9 154.7 1.0
C4A A:CLA806 3.0 154.7 1.0
C1C A:CLA806 3.0 154.7 1.0
C1A A:CLA806 3.0 154.7 1.0
C1B A:CLA806 3.0 154.7 1.0
C4B A:CLA806 3.1 154.7 1.0
C4C A:CLA806 3.1 154.7 1.0
C1D A:CLA806 3.1 154.7 1.0
CHA A:CLA806 3.3 154.7 1.0
CHB A:CLA806 3.4 154.7 1.0
CHC A:CLA806 3.4 154.7 1.0
CHD A:CLA806 3.5 154.7 1.0
C3D A:CLA806 4.1 154.7 1.0
C2B A:CLA806 4.2 154.7 1.0
C2D A:CLA806 4.2 154.7 1.0
C3B A:CLA806 4.2 154.7 1.0
C2C A:CLA806 4.3 154.7 1.0
C3C A:CLA806 4.3 154.7 1.0
C3A A:CLA806 4.3 154.7 1.0
C2A A:CLA806 4.3 154.7 1.0
CBA A:CLA806 4.5 154.7 1.0
CBD A:CLA806 4.8 154.7 1.0

Magnesium binding site 7 out of 166 in 7wyi

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Magnesium binding site 7 out of 166 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg807

b:147.8
occ:1.00
MG A:CLA807 0.0 147.8 1.0
NB A:CLA807 1.9 147.8 1.0
ND A:CLA807 1.9 147.8 1.0
NA A:CLA807 1.9 147.8 1.0
NC A:CLA807 2.0 147.8 1.0
C4D A:CLA807 2.9 147.8 1.0
C1A A:CLA807 3.0 147.8 1.0
C4A A:CLA807 3.0 147.8 1.0
C1C A:CLA807 3.0 147.8 1.0
C1B A:CLA807 3.0 147.8 1.0
C4B A:CLA807 3.0 147.8 1.0
C1D A:CLA807 3.1 147.8 1.0
C4C A:CLA807 3.1 147.8 1.0
CHA A:CLA807 3.3 147.8 1.0
CHB A:CLA807 3.4 147.8 1.0
CHC A:CLA807 3.4 147.8 1.0
CHD A:CLA807 3.5 147.8 1.0
C3D A:CLA807 4.1 147.8 1.0
C2B A:CLA807 4.2 147.8 1.0
C3B A:CLA807 4.2 147.8 1.0
C2D A:CLA807 4.2 147.8 1.0
C2A A:CLA807 4.2 147.8 1.0
C2C A:CLA807 4.2 147.8 1.0
C3A A:CLA807 4.3 147.8 1.0
C3C A:CLA807 4.3 147.8 1.0
CAA A:CLA807 4.5 147.8 1.0
CBD A:CLA807 4.8 147.8 1.0

Magnesium binding site 8 out of 166 in 7wyi

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Magnesium binding site 8 out of 166 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg808

b:139.8
occ:1.00
MG A:CLA808 0.0 139.8 1.0
ND A:CLA808 1.9 139.8 1.0
NB A:CLA808 1.9 139.8 1.0
NA A:CLA808 2.0 139.8 1.0
NC A:CLA808 2.0 139.8 1.0
C4D A:CLA808 2.9 139.8 1.0
C4A A:CLA808 3.0 139.8 1.0
C1C A:CLA808 3.0 139.8 1.0
C1B A:CLA808 3.0 139.8 1.0
C1A A:CLA808 3.0 139.8 1.0
C4B A:CLA808 3.1 139.8 1.0
C4C A:CLA808 3.1 139.8 1.0
C1D A:CLA808 3.1 139.8 1.0
CHB A:CLA808 3.3 139.8 1.0
CHA A:CLA808 3.4 139.8 1.0
CHC A:CLA808 3.4 139.8 1.0
CHD A:CLA808 3.5 139.8 1.0
C3D A:CLA808 4.1 139.8 1.0
C2B A:CLA808 4.2 139.8 1.0
C2D A:CLA808 4.2 139.8 1.0
C3B A:CLA808 4.2 139.8 1.0
C2C A:CLA808 4.3 139.8 1.0
C3A A:CLA808 4.3 139.8 1.0
C3C A:CLA808 4.3 139.8 1.0
C2A A:CLA808 4.3 139.8 1.0
CBD A:CLA808 4.8 139.8 1.0
CBB A:CLA807 4.9 147.8 1.0

Magnesium binding site 9 out of 166 in 7wyi

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Magnesium binding site 9 out of 166 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg809

b:143.7
occ:1.00
MG A:CLA809 0.0 143.7 1.0
NB A:CLA809 1.9 143.7 1.0
ND A:CLA809 1.9 143.7 1.0
NA A:CLA809 1.9 143.7 1.0
NC A:CLA809 2.0 143.7 1.0
C4D A:CLA809 2.9 143.7 1.0
C4A A:CLA809 3.0 143.7 1.0
C1A A:CLA809 3.0 143.7 1.0
C1C A:CLA809 3.0 143.7 1.0
C1B A:CLA809 3.0 143.7 1.0
C4B A:CLA809 3.0 143.7 1.0
C1D A:CLA809 3.1 143.7 1.0
C4C A:CLA809 3.1 143.7 1.0
CHA A:CLA809 3.3 143.7 1.0
CHB A:CLA809 3.4 143.7 1.0
CHC A:CLA809 3.4 143.7 1.0
CHD A:CLA809 3.5 143.7 1.0
CBA A:CLA809 4.1 143.7 1.0
C3D A:CLA809 4.1 143.7 1.0
C2B A:CLA809 4.2 143.7 1.0
C3B A:CLA809 4.2 143.7 1.0
C2D A:CLA809 4.2 143.7 1.0
C2C A:CLA809 4.2 143.7 1.0
C2A A:CLA809 4.3 143.7 1.0
C3A A:CLA809 4.3 143.7 1.0
C3C A:CLA809 4.3 143.7 1.0
CAA A:CLA803 4.7 148.2 1.0
CAA A:CLA809 4.8 143.7 1.0
CBD A:CLA809 4.8 143.7 1.0
CBA A:CLA803 4.8 148.2 1.0

Magnesium binding site 10 out of 166 in 7wyi

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Magnesium binding site 10 out of 166 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg810

b:144.8
occ:1.00
MG A:CLA810 0.0 144.8 1.0
ND A:CLA810 1.9 144.8 1.0
NB A:CLA810 1.9 144.8 1.0
NA A:CLA810 2.0 144.8 1.0
NC A:CLA810 2.0 144.8 1.0
C4D A:CLA810 2.9 144.8 1.0
C4A A:CLA810 3.0 144.8 1.0
C1C A:CLA810 3.0 144.8 1.0
C1A A:CLA810 3.0 144.8 1.0
C1B A:CLA810 3.0 144.8 1.0
C4B A:CLA810 3.1 144.8 1.0
C4C A:CLA810 3.1 144.8 1.0
C1D A:CLA810 3.1 144.8 1.0
CHA A:CLA810 3.3 144.8 1.0
CHB A:CLA810 3.4 144.8 1.0
CHC A:CLA810 3.4 144.8 1.0
CHD A:CLA810 3.5 144.8 1.0
C3D A:CLA810 4.1 144.8 1.0
C2B A:CLA810 4.2 144.8 1.0
C2D A:CLA810 4.2 144.8 1.0
C3B A:CLA810 4.2 144.8 1.0
C2C A:CLA810 4.2 144.8 1.0
C3C A:CLA810 4.3 144.8 1.0
C3A A:CLA810 4.3 144.8 1.0
C2A A:CLA810 4.3 144.8 1.0
CBA A:CLA810 4.7 144.8 1.0
CBD A:CLA810 4.8 144.8 1.0

Reference:

G.Kurisu, C.Gerle, A.Kawamoto, K.Mitsuoka, H.Tanaka, Y.Misumi, J.Minagawa, H.Kubota-Kawai, R.Tokotsu, Y.Fujiyoshi, K.Abe. Structure of Photosystem I From Chlamydomonas Reinhardtii To Be Published.
Page generated: Thu Aug 14 17:41:20 2025

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