Atomistry » Magnesium » PDB 7xld-7y41 » 7xy9
Atomistry »
  Magnesium »
    PDB 7xld-7y41 »
      7xy9 »

Magnesium in PDB 7xy9: Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions

Enzymatic activity of Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions

All present enzymatic activity of Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions:
1.1.1.80;

Other elements in 7xy9:

The structure of Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions also contains other interesting chemical elements:

Zinc (Zn) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions (pdb code 7xy9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 8 binding sites of Magnesium where determined in the Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions, PDB code: 7xy9:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Magnesium binding site 1 out of 8 in 7xy9

Go back to Magnesium Binding Sites List in 7xy9
Magnesium binding site 1 out of 8 in the Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:37.0
occ:1.00
 OE1 C:GLN96 2.9 23.0 1.0
N A:ARG301 3.2 15.6 1.0
O A:GLY297 3.2 25.0 1.0
N A:LEU300 3.3 12.1 1.0
C A:GLY298 3.3 11.2 1.0
CA A:GLY298 3.4 12.8 1.0
CB A:LEU300 3.6 14.2 1.0
N A:ARG299 3.7 19.4 1.0
O A:GLY298 3.7 22.3 1.0
CA A:LEU300 3.8 15.5 1.0
CD C:GLN96 3.8 17.8 1.0
C A:GLY297 3.8 22.3 1.0
CB A:ARG301 3.9 18.2 1.0
N A:GLY298 3.9 29.4 1.0
C A:LEU300 3.9 13.1 1.0
CA A:ARG301 4.1 14.2 1.0
C A:ARG299 4.2 8.4 1.0
O C:HOH676 4.3 31.3 1.0
CA A:ARG299 4.5 11.9 1.0
CB C:GLN96 4.5 17.7 1.0
CG C:GLN96 4.5 16.1 1.0
CZ2 A:TRP90 4.6 14.9 1.0
NE2 C:GLN96 4.6 15.5 1.0
CG A:LEU300 4.7 23.6 1.0
CH2 A:TRP90 4.7 21.0 1.0

Magnesium binding site 2 out of 8 in 7xy9

Go back to Magnesium Binding Sites List in 7xy9
Magnesium binding site 2 out of 8 in the Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg403

b:8.0
occ:1.00
 NE2 A:HIS157 2.0 23.0 1.0
NE2 A:HIS102 2.2 20.1 1.0
SG A:CYS295 2.3 39.5 1.0
ND1 A:HIS100 2.4 23.5 1.0
CB A:CYS295 2.6 20.0 1.0
CE1 A:HIS157 3.0 13.1 1.0
CD2 A:HIS157 3.0 10.0 1.0
CD2 A:HIS102 3.2 8.9 1.0
CE1 A:HIS102 3.2 16.1 1.0
CG A:HIS100 3.3 16.6 1.0
CB A:HIS100 3.4 15.2 1.0
CE1 A:HIS100 3.5 16.9 1.0
CA A:CYS295 4.0 23.0 1.0
ND1 A:HIS157 4.1 15.2 1.0
CG A:HIS157 4.1 10.3 1.0
ND1 A:HIS102 4.3 24.3 1.0
CG A:HIS102 4.3 18.2 1.0
CE2 A:TYR99 4.4 16.2 1.0
CD2 A:TYR99 4.5 17.9 1.0
CD2 A:HIS100 4.5 17.6 1.0
N A:CYS295 4.5 35.4 1.0
N A:PRO296 4.5 33.1 1.0
NE2 A:HIS100 4.6 22.5 1.0
CD1 A:LEU161 4.6 18.8 1.0
C A:CYS295 4.7 34.5 1.0
CD A:PRO296 4.7 25.9 1.0
O A:TYR99 4.7 19.8 1.0
CD2 A:LEU161 4.8 15.3 1.0
CA A:HIS100 4.9 16.8 1.0

Magnesium binding site 3 out of 8 in 7xy9

Go back to Magnesium Binding Sites List in 7xy9
Magnesium binding site 3 out of 8 in the Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg501

b:23.0
occ:1.00
 OE1 D:GLN96 3.1 21.0 1.0
O B:GLY297 3.1 22.7 1.0
N B:ARG301 3.2 13.9 1.0
N B:LEU300 3.3 10.7 1.0
C B:GLY298 3.4 12.2 1.0
CA B:GLY298 3.4 14.8 1.0
CB B:LEU300 3.6 13.1 1.0
N B:ARG299 3.7 19.3 1.0
O B:GLY298 3.7 22.1 1.0
CA B:LEU300 3.8 15.1 1.0
C B:GLY297 3.8 22.3 1.0
CB B:ARG301 3.9 20.2 1.0
CD D:GLN96 3.9 16.8 1.0
N B:GLY298 3.9 28.5 1.0
C B:LEU300 4.0 11.5 1.0
CA B:ARG301 4.1 15.8 1.0
C B:ARG299 4.2 8.7 1.0
O D:HOH643 4.3 27.3 1.0
CB D:GLN96 4.5 17.9 1.0
CA B:ARG299 4.5 14.9 1.0
CZ2 B:TRP90 4.6 16.2 1.0
CG B:LEU300 4.6 21.0 1.0
CG D:GLN96 4.7 18.7 1.0
CH2 B:TRP90 4.7 20.8 1.0
NE2 D:GLN96 4.7 19.2 1.0
CD2 B:LEU300 4.9 18.3 1.0

Magnesium binding site 4 out of 8 in 7xy9

Go back to Magnesium Binding Sites List in 7xy9
Magnesium binding site 4 out of 8 in the Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg502

b:7.7
occ:1.00
 NE2 B:HIS157 2.0 19.7 1.0
NE2 B:HIS102 2.2 19.8 1.0
SG B:CYS295 2.4 35.5 1.0
ND1 B:HIS100 2.4 21.1 1.0
CB B:CYS295 2.6 21.0 1.0
CE1 B:HIS157 3.0 11.1 1.0
CD2 B:HIS157 3.1 8.3 1.0
CD2 B:HIS102 3.2 9.9 1.0
CE1 B:HIS102 3.2 16.4 1.0
CG B:HIS100 3.3 16.1 1.0
CB B:HIS100 3.4 13.2 1.0
CE1 B:HIS100 3.5 16.6 1.0
ND1 B:HIS157 4.1 15.2 1.0
CA B:CYS295 4.1 22.6 1.0
CG B:HIS157 4.1 8.8 1.0
ND1 B:HIS102 4.3 23.7 1.0
CG B:HIS102 4.3 18.8 1.0
CE2 B:TYR99 4.4 16.4 1.0
CD2 B:TYR99 4.5 16.8 1.0
CD2 B:HIS100 4.5 17.9 1.0
NE2 B:HIS100 4.6 22.8 1.0
N B:PRO296 4.6 30.8 1.0
CD1 B:LEU161 4.6 17.6 1.0
N B:CYS295 4.6 32.2 1.0
CD B:PRO296 4.7 25.3 1.0
C B:CYS295 4.7 31.5 1.0
O B:TYR99 4.7 20.2 1.0
CD2 B:LEU161 4.8 12.5 1.0
CA B:HIS100 4.8 16.1 1.0

Magnesium binding site 5 out of 8 in 7xy9

Go back to Magnesium Binding Sites List in 7xy9
Magnesium binding site 5 out of 8 in the Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg501

b:31.1
occ:1.00
 OE1 A:GLN96 3.1 21.2 1.0
O C:GLY297 3.2 25.6 1.0
N C:ARG301 3.2 13.9 1.0
N C:LEU300 3.3 13.0 1.0
C C:GLY298 3.3 11.3 1.0
CA C:GLY298 3.4 16.4 1.0
CB C:LEU300 3.6 15.1 1.0
N C:ARG299 3.7 16.0 1.0
O C:GLY298 3.7 25.1 1.0
CA C:LEU300 3.8 17.8 1.0
C C:GLY297 3.8 20.7 1.0
CB C:ARG301 3.9 18.3 1.0
CD A:GLN96 3.9 17.7 1.0
N C:GLY298 3.9 27.8 1.0
C C:LEU300 4.0 12.6 1.0
CA C:ARG301 4.1 13.4 1.0
C C:ARG299 4.2 10.6 1.0
O A:HOH539 4.3 32.0 1.0
CB A:GLN96 4.5 20.8 1.0
CA C:ARG299 4.6 17.1 1.0
CG A:GLN96 4.6 19.2 1.0
CZ2 C:TRP90 4.6 16.0 1.0
CG C:LEU300 4.7 21.9 1.0
CH2 C:TRP90 4.7 17.9 1.0
NE2 A:GLN96 4.8 20.2 1.0
CD2 C:LEU300 5.0 17.6 1.0

Magnesium binding site 6 out of 8 in 7xy9

Go back to Magnesium Binding Sites List in 7xy9
Magnesium binding site 6 out of 8 in the Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg502

b:8.9
occ:1.00
 NE2 C:HIS157 2.0 23.4 1.0
NE2 C:HIS102 2.2 15.1 1.0
SG C:CYS295 2.3 36.7 1.0
ND1 C:HIS100 2.4 19.7 1.0
CB C:CYS295 2.7 22.2 1.0
CE1 C:HIS157 3.0 12.3 1.0
CD2 C:HIS157 3.0 11.8 1.0
CD2 C:HIS102 3.2 9.7 1.0
CE1 C:HIS102 3.2 17.8 1.0
CG C:HIS100 3.3 20.2 1.0
CB C:HIS100 3.4 14.4 1.0
CE1 C:HIS100 3.4 16.6 1.0
ND1 C:HIS157 4.1 17.3 1.0
CA C:CYS295 4.1 24.9 1.0
CG C:HIS157 4.1 9.6 1.0
ND1 C:HIS102 4.3 23.0 1.0
CG C:HIS102 4.3 18.0 1.0
CE2 C:TYR99 4.4 16.0 1.0
CD2 C:TYR99 4.5 15.9 1.0
CD2 C:HIS100 4.5 20.1 1.0
CD C:PRO296 4.5 28.5 1.0
NE2 C:HIS100 4.5 20.6 1.0
N C:PRO296 4.5 35.6 1.0
N C:CYS295 4.6 31.6 1.0
CD1 C:LEU161 4.6 19.9 1.0
O C:TYR99 4.7 18.5 1.0
C C:CYS295 4.7 32.4 1.0
CD2 C:LEU161 4.8 16.9 1.0
CA C:HIS100 4.9 16.7 1.0

Magnesium binding site 7 out of 8 in 7xy9

Go back to Magnesium Binding Sites List in 7xy9
Magnesium binding site 7 out of 8 in the Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg501

b:34.0
occ:1.00
 OE1 B:GLN96 3.1 20.3 1.0
O D:GLY297 3.1 25.5 1.0
N D:ARG301 3.2 12.0 1.0
N D:LEU300 3.3 13.5 1.0
C D:GLY298 3.3 10.8 1.0
CA D:GLY298 3.4 16.2 1.0
CB D:LEU300 3.6 17.3 1.0
N D:ARG299 3.7 16.9 1.0
O D:GLY298 3.7 24.6 1.0
CA D:LEU300 3.8 17.5 1.0
C D:GLY297 3.8 21.1 1.0
CB D:ARG301 3.9 19.1 1.0
CD B:GLN96 3.9 17.4 1.0
N D:GLY298 3.9 27.8 1.0
C D:LEU300 4.0 12.6 1.0
CA D:ARG301 4.1 16.2 1.0
C D:ARG299 4.2 10.7 1.0
O B:HOH632 4.3 27.3 1.0
CB B:GLN96 4.5 20.8 1.0
CA D:ARG299 4.5 16.6 1.0
CZ2 D:TRP90 4.6 16.3 1.0
CH2 D:TRP90 4.6 18.7 1.0
CG B:GLN96 4.6 18.8 1.0
CG D:LEU300 4.7 21.2 1.0
NE2 B:GLN96 4.7 17.4 1.0
CD2 D:LEU300 5.0 18.6 1.0

Magnesium binding site 8 out of 8 in 7xy9

Go back to Magnesium Binding Sites List in 7xy9
Magnesium binding site 8 out of 8 in the Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg502

b:7.3
occ:1.00
 NE2 D:HIS157 2.0 21.4 1.0
NE2 D:HIS102 2.2 16.6 1.0
SG D:CYS295 2.3 37.6 1.0
ND1 D:HIS100 2.4 21.2 1.0
CB D:CYS295 2.7 20.6 1.0
CE1 D:HIS157 3.0 13.0 1.0
CD2 D:HIS157 3.0 11.6 1.0
CD2 D:HIS102 3.2 7.4 1.0
CE1 D:HIS102 3.2 18.6 1.0
CG D:HIS100 3.3 18.7 1.0
CB D:HIS100 3.4 14.8 1.0
CE1 D:HIS100 3.5 17.8 1.0
ND1 D:HIS157 4.1 17.0 1.0
CA D:CYS295 4.1 23.7 1.0
CG D:HIS157 4.1 9.6 1.0
ND1 D:HIS102 4.3 23.4 1.0
CG D:HIS102 4.3 19.6 1.0
CE2 D:TYR99 4.4 15.4 1.0
CD2 D:TYR99 4.5 15.5 1.0
CD2 D:HIS100 4.5 19.8 1.0
N D:PRO296 4.5 35.6 1.0
CD D:PRO296 4.5 29.1 1.0
NE2 D:HIS100 4.6 23.1 1.0
N D:CYS295 4.6 31.1 1.0
CD1 D:LEU161 4.6 20.8 1.0
C D:CYS295 4.7 32.6 1.0
O D:TYR99 4.7 18.5 1.0
CD2 D:LEU161 4.8 16.2 1.0
CA D:HIS100 4.9 18.7 1.0

Reference:

Q.Chen, X.Li, F.Yang, G.Qu, Z.T.Sun, Y.J.Wang. Cryo-Em Structure of Secondary Alcohol Dehydrogenases Tbsadh After Carrier-Free Immobilization Based on Weak Intermolecular Interactions To Be Published.
Page generated: Thu Oct 3 13:24:46 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy