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Magnesium in PDB 8asb: Structure of the Sftsv L Protein Stalled at Early Elongation with the Endonuclease Domain in A Raised Conformation [Early-Elongation-Endo]

Enzymatic activity of Structure of the Sftsv L Protein Stalled at Early Elongation with the Endonuclease Domain in A Raised Conformation [Early-Elongation-Endo]

All present enzymatic activity of Structure of the Sftsv L Protein Stalled at Early Elongation with the Endonuclease Domain in A Raised Conformation [Early-Elongation-Endo]:
2.7.7.48;

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of the Sftsv L Protein Stalled at Early Elongation with the Endonuclease Domain in A Raised Conformation [Early-Elongation-Endo] (pdb code 8asb). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Sftsv L Protein Stalled at Early Elongation with the Endonuclease Domain in A Raised Conformation [Early-Elongation-Endo], PDB code: 8asb:

Magnesium binding site 1 out of 1 in 8asb

Go back to Magnesium Binding Sites List in 8asb
Magnesium binding site 1 out of 1 in the Structure of the Sftsv L Protein Stalled at Early Elongation with the Endonuclease Domain in A Raised Conformation [Early-Elongation-Endo]


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Sftsv L Protein Stalled at Early Elongation with the Endonuclease Domain in A Raised Conformation [Early-Elongation-Endo] within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2101

b:70.4
occ:1.00
O2A A:2KH2102 2.1 71.6 1.0
OD1 A:ASP985 2.1 62.3 1.0
OD2 A:ASP1126 2.2 65.8 1.0
CG A:ASP985 2.8 62.3 1.0
OD2 A:ASP985 2.9 62.3 1.0
CG A:ASP1126 3.1 65.8 1.0
O1G A:2KH2102 3.2 71.6 1.0
OD1 A:ASP1126 3.3 65.8 1.0
O3' G:A3 3.4 81.2 1.0
PA A:2KH2102 3.6 71.6 1.0
O A:ALA986 3.8 60.2 1.0
O1B A:2KH2102 4.0 71.6 1.0
C5' A:2KH2102 4.2 71.6 1.0
O5' A:2KH2102 4.2 71.6 1.0
O1A A:2KH2102 4.3 71.6 1.0
CB A:ASP985 4.3 62.3 1.0
PG A:2KH2102 4.4 71.6 1.0
CB A:ASP1126 4.5 65.8 1.0
O2G A:2KH2102 4.5 71.6 1.0
N A:ALA986 4.6 60.2 1.0
N3A A:2KH2102 4.7 71.6 1.0
PB A:2KH2102 4.8 71.6 1.0
C3' G:A3 4.8 81.2 1.0
C A:ALA986 4.9 60.2 1.0
CA A:ASP985 5.0 62.3 1.0

Reference:

H.M.Williams, S.R.Thorkelsson, D.Vogel, M.Milewski, C.Busch, S.Cusack, K.Grunewald, E.R.J.Quemin, M.Rosenthal. Structural Insights Into Viral Genome Replication By the Severe Fever with Thrombocytopenia Syndrome Virus L Protein Nucleic Acids Res. 2023.
ISSN: ESSN 1362-4962
DOI: 10.1093/NAR/GKAC1249
Page generated: Thu Oct 3 18:43:27 2024

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