Magnesium in PDB 8bpr: Complex of Recf-Reco-Recr-Dna From Thermus Thermophilus (Low Resolution Reconstruction).

The structure of Complex of Recf-Reco-Recr-Dna From Thermus Thermophilus (Low Resolution Reconstruction). also contains other interesting chemical elements:

Zinc

(Zn)

3 atoms

The binding sites of Magnesium atom in the Complex of Recf-Reco-Recr-Dna From Thermus Thermophilus (Low Resolution Reconstruction). (pdb code 8bpr). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Complex of Recf-Reco-Recr-Dna From Thermus Thermophilus (Low Resolution Reconstruction)., PDB code: 8bpr:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Complex of Recf-Reco-Recr-Dna From Thermus Thermophilus (Low Resolution Reconstruction).


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Complex of Recf-Reco-Recr-Dna From Thermus Thermophilus (Low Resolution Reconstruction). within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg902 b:71.9 occ:1.00 O1B A:ANP901 2.1 88.6 1.0 O2G A:ANP901 2.1 88.6 1.0 OG1 A:THR37 2.2 78.4 1.0 CB A:THR37 3.4 78.4 1.0 PB A:ANP901 3.4 88.6 1.0 PG A:ANP901 3.5 88.6 1.0 N3B A:ANP901 3.7 88.6 1.0 CG2 A:THR37 4.1 78.4 1.0 O2A A:ANP901 4.3 88.6 1.0 OD2 A:ASP293 4.3 74.0 1.0 O3G A:ANP901 4.4 88.6 1.0 O3A A:ANP901 4.4 88.6 1.0 O1G A:ANP901 4.4 88.6 1.0 O2B A:ANP901 4.5 88.6 1.0 CA A:THR37 4.5 78.4 1.0 N A:THR37 4.5 78.4 1.0 OE2 A:GLU294 4.5 81.5 1.0 CG B:ARG262 4.7 85.2 1.0 OD1 A:ASP293 4.8 74.0 1.0 PA A:ANP901 4.8 88.6 1.0 CG A:ASP293 5.0 74.0 1.0

Magnesium binding site 2 out of 2 in the Complex of Recf-Reco-Recr-Dna From Thermus Thermophilus (Low Resolution Reconstruction).


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Complex of Recf-Reco-Recr-Dna From Thermus Thermophilus (Low Resolution Reconstruction). within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg902 b:77.0 occ:1.00 O2G B:ANP901 2.1 80.5 1.0 OG1 B:THR37 2.1 70.8 1.0 O1B B:ANP901 2.1 80.5 1.0 CB B:THR37 3.2 70.8 1.0 PB B:ANP901 3.3 80.5 1.0 PG B:ANP901 3.4 80.5 1.0 N3B B:ANP901 3.5 80.5 1.0 O2A B:ANP901 3.9 80.5 1.0 CG2 B:THR37 4.0 70.8 1.0 O3A B:ANP901 4.2 80.5 1.0 O3G B:ANP901 4.3 80.5 1.0 O1G B:ANP901 4.3 80.5 1.0 CA B:THR37 4.4 70.8 1.0 N B:THR37 4.4 70.8 1.0 O2B B:ANP901 4.5 80.5 1.0 PA B:ANP901 4.5 80.5 1.0 CG A:ARG262 4.7 80.8 1.0 CB A:SER261 4.7 82.5 1.0 OD1 B:ASP293 4.8 83.7 1.0 N A:ARG262 4.9 80.8 1.0 O1A B:ANP901 5.0 80.5 1.0 OD2 B:ASP293 5.0 83.7 1.0

S.Nirwal, M.Czarnocki-Cieciura, A.Chaudhary, W.Zajko, K.Skowronek, S.Chamera, M.Figiel, M.Nowotny. Mechanism of Recf-Reco-Recr Cooperation in Bacterial Homologous Recombination Nat.Struct.Mol.Biol. 2023.
ISSN: ESSN 1545-9985
DOI: 10.1038/S41594-023-00967-Z