Magnesium in PDB 8byz: Fragment-Linked Stabilizer For Era - 14-3-3 Interaction (AZ210)

The structure of Fragment-Linked Stabilizer For Era - 14-3-3 Interaction (AZ210), PDB code: 8byz was solved by E.J.Visser, E.Sijbesma, C.Ottmann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.35 / 1.40
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	81.632, 111.805, 62.489, 90, 90, 90
R / Rfree (%)	16.9 / 18.2

The binding sites of Magnesium atom in the Fragment-Linked Stabilizer For Era - 14-3-3 Interaction (AZ210) (pdb code 8byz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Fragment-Linked Stabilizer For Era - 14-3-3 Interaction (AZ210), PDB code: 8byz:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Fragment-Linked Stabilizer For Era - 14-3-3 Interaction (AZ210)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Fragment-Linked Stabilizer For Era - 14-3-3 Interaction (AZ210) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg301 b:31.0 occ:1.00 O A:HOH427 2.7 16.8 1.0 O A:HOH594 3.1 23.9 1.0 O A:HOH474 3.4 30.4 1.0 HZ2 A:LYS159 3.7 35.9 1.0 O A:HOH564 4.3 18.5 1.0 HZ1 A:LYS159 4.3 35.9 1.0 NZ A:LYS159 4.5 29.9 1.0 HE22 A:GLN152 4.5 20.4 1.0 OE2 A:GLU189 4.6 15.1 1.0 O A:HOH658 4.7 29.6 1.0 HZ3 A:LYS159 4.9 35.9 1.0

Magnesium binding site 2 out of 2 in the Fragment-Linked Stabilizer For Era - 14-3-3 Interaction (AZ210)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Fragment-Linked Stabilizer For Era - 14-3-3 Interaction (AZ210) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg302 b:13.2 occ:0.62 OE1 A:GLU2 2.6 17.7 1.0 O A:HOH418 2.7 16.3 1.0 CD A:GLU2 3.6 16.6 1.0 OE2 A:GLU2 4.0 16.9 1.0 HA A:GLU2 4.0 13.2 1.0 H A:ARG3 4.2 14.9 1.0 O A:HOH574 4.5 17.3 1.0 O A:HOH686 4.6 18.2 1.0 CG A:GLU2 4.8 13.7 1.0 HB3 A:GLU2 4.9 16.3 1.0 CA A:GLU2 4.9 10.9 1.0 N A:ARG3 5.0 12.4 1.0

E.J.Visser, P.Jaishankar, E.Sijbesma, M.A.M.Pennings, E.M.F.Vandenboorn, X.Guillory, R.J.Neitz, J.Morrow, S.Dutta, A.R.Renslo, L.Brunsveld, M.R.Arkin, C.Ottmann. From Tethered to Freestanding Stabilizers of 14-3-3 Protein-Protein Interactions Via Fragment Linking. Angew.Chem.Int.Ed.Engl. 08004 2023.
ISSN: ESSN 1521-3773
PubMed: 37455289
DOI: 10.1002/ANIE.202308004