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Magnesium in PDB 8c2e: Structure of 14-3-3 Sigma Delta C with Electrophilic Peptide 4IEA-5

Protein crystallography data

The structure of Structure of 14-3-3 Sigma Delta C with Electrophilic Peptide 4IEA-5, PDB code: 8c2e was solved by M.C.M.Van Den Oetelaar, C.Ottmann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 55.92 / 2.20
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 82.513, 111.724, 63.077, 90, 90, 90
R / Rfree (%) 17.5 / 22.1

Other elements in 8c2e:

The structure of Structure of 14-3-3 Sigma Delta C with Electrophilic Peptide 4IEA-5 also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of 14-3-3 Sigma Delta C with Electrophilic Peptide 4IEA-5 (pdb code 8c2e). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of 14-3-3 Sigma Delta C with Electrophilic Peptide 4IEA-5, PDB code: 8c2e:

Magnesium binding site 1 out of 1 in 8c2e

Go back to Magnesium Binding Sites List in 8c2e
Magnesium binding site 1 out of 1 in the Structure of 14-3-3 Sigma Delta C with Electrophilic Peptide 4IEA-5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of 14-3-3 Sigma Delta C with Electrophilic Peptide 4IEA-5 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg302

b:33.8
occ:1.00
OE1 A:GLU75 2.0 69.2 1.0
CD A:GLU75 3.2 65.1 1.0
CG A:GLU75 3.9 68.5 1.0
OE2 A:GLU75 4.1 62.8 1.0
CB A:GLU75 4.1 68.0 1.0
CA A:GLU75 4.9 61.6 1.0

Reference:

R.Gabizon, B.Tivon, R.N.Reddi, M.C.M.Van Den Oetelaar, H.Amartely, P.J.Cossar, C.Ottmann, N.London. A Simple Method For Developing Lysine Targeted Covalent Protein Reagents Nat Commun 2023.
ISSN: ESSN 2041-1723
Page generated: Thu Oct 3 20:04:59 2024

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