Magnesium in PDB 8cns: The Hybrid Cluster Protein From the Thermophilic Methanogen Methanothermococcus Thermolithotrophicus in A Mixed Redox State After Soaking with Hydroxylamine, at 1.36-A Resolution.

Enzymatic activity of The Hybrid Cluster Protein From the Thermophilic Methanogen Methanothermococcus Thermolithotrophicus in A Mixed Redox State After Soaking with Hydroxylamine, at 1.36-A Resolution.

All present enzymatic activity of The Hybrid Cluster Protein From the Thermophilic Methanogen Methanothermococcus Thermolithotrophicus in A Mixed Redox State After Soaking with Hydroxylamine, at 1.36-A Resolution.:
1.7.99.1;

Protein crystallography data

The structure of The Hybrid Cluster Protein From the Thermophilic Methanogen Methanothermococcus Thermolithotrophicus in A Mixed Redox State After Soaking with Hydroxylamine, at 1.36-A Resolution., PDB code: 8cns was solved by O.N.Lemaire, T.Wagner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	51.09 / 1.36
*Space group*	P 2₁ 2₁ 2
*Cell size a, b, c (Å), α, β, γ (°)*	97.773, 102.186, 58.323, 90, 90, 90
*R / R_free (%)*	12.9 / 16.6

Other elements in 8cns:

The structure of The Hybrid Cluster Protein From the Thermophilic Methanogen Methanothermococcus Thermolithotrophicus in A Mixed Redox State After Soaking with Hydroxylamine, at 1.36-A Resolution. also contains other interesting chemical elements:

Iron

(Fe)

12 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Hybrid Cluster Protein From the Thermophilic Methanogen Methanothermococcus Thermolithotrophicus in A Mixed Redox State After Soaking with Hydroxylamine, at 1.36-A Resolution. (pdb code 8cns). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Hybrid Cluster Protein From the Thermophilic Methanogen Methanothermococcus Thermolithotrophicus in A Mixed Redox State After Soaking with Hydroxylamine, at 1.36-A Resolution., PDB code: 8cns:

Magnesium binding site 1 out of 1 in 8cns

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Magnesium Binding Sites List in 8cns

Magnesium binding site 1 out of 1 in the The Hybrid Cluster Protein From the Thermophilic Methanogen Methanothermococcus Thermolithotrophicus in A Mixed Redox State After Soaking with Hydroxylamine, at 1.36-A Resolution.

Mono view

Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Hybrid Cluster Protein From the Thermophilic Methanogen Methanothermococcus Thermolithotrophicus in A Mixed Redox State After Soaking with Hydroxylamine, at 1.36-A Resolution. within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Mg904 b:50.6 occ:1.00	O	A:HOH1351	2.0	34.9	1.0
	NZ	A:LYS80	2.1	33.1	1.0
	OD1	A:ASP79	2.3	21.6	1.0
	O	A:HOH1410	2.4	50.1	1.0
	CG	A:ASP79	3.3	19.9	1.0
	OD2	A:ASP79	3.5	24.8	1.0
	CE	A:LYS80	3.5	32.9	1.0
	CG	A:LYS80	3.9	25.9	1.0
	O	A:HOH1254	4.0	22.8	1.0
	OD1	A:ASP78	4.1	17.0	1.0
	CD	A:LYS80	4.1	30.1	1.0
	O	A:HOH1617	4.2	42.5	1.0
	CB	A:PRO332	4.5	16.2	1.0
	CG	A:PRO332	4.6	16.7	1.0
	N	A:LYS80	4.6	13.1	1.0
	CB	A:ASP79	4.7	15.4	1.0
	O	A:HOH1474	4.7	37.1	1.0
	N	A:ASP79	4.8	13.4	1.0
	CB	A:LYS80	4.9	19.3	1.0

Reference:

O.N.Lemaire, M.Belhamri, T.Wagner. Structural and Biochemical Elucidation of Class I Hybrid Cluster Protein Natively Extracted From A Marine Methanogenic Archaeon To Be Published.

Page generated: Thu Oct 3 22:42:00 2024

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