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Magnesium in PDB 8f4i: Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution

Enzymatic activity of Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution

All present enzymatic activity of Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution:
1.10.3.9;

Protein crystallography data

The structure of Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution, PDB code: 8f4i was solved by A.Bhowmick, R.Hussein, I.Bogacz, P.S.Simon, M.Ibrahim, R.Chatterjee, M.D.Doyle, M.H.Cheah, T.Fransson, P.Chernev, I.-S.Kim, H.Makita, M.Dasgupta, C.J.Kaminsky, M.Zhang, J.Gatcke, S.Haupt, I.I.Nangca, S.M.Keable, O.Aydin, K.Tono, S.Owada, L.B.Gee, F.D.Fuller, A.Batyuk, R.Alonso-Mori, J.M.Holton, D.W.Paley, N.W.Moriarty, F.Mamedov, P.D.Adams, A.S.Brewster, H.Dobbek, N.K.Sauter, U.Bergmann, A.Zouni, J.Messinger, J.Kern, J.Yano, V.K.Yachandra, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.72 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 117.31, 222.595, 308.896, 90, 90, 90
R / Rfree (%) 18.6 / 23.2

Other elements in 8f4i:

The structure of Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution also contains other interesting chemical elements:

Calcium (Ca) 6 atoms
Iron (Fe) 6 atoms
Manganese (Mn) 24 atoms
Chlorine (Cl) 4 atoms

Magnesium Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 50; Page 6, Binding sites: 51 - 60; Page 7, Binding sites: 61 - 70;

Binding sites:

The binding sites of Magnesium atom in the Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution (pdb code 8f4i). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 70 binding sites of Magnesium where determined in the Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution, PDB code: 8f4i:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 70 in 8f4i

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Magnesium binding site 1 out of 70 in the Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg606

b:20.4
occ:1.00
MG A:CLA606 0.0 20.4 1.0
ND A:CLA606 2.0 22.6 1.0
NB A:CLA606 2.1 23.9 1.0
NA A:CLA606 2.1 23.4 1.0
NC A:CLA606 2.1 19.2 1.0
NE2 A:HIS198 2.2 24.7 1.0
C4D A:CLA606 2.9 21.2 1.0
C4A A:CLA606 3.1 28.6 1.0
C1B A:CLA606 3.1 23.9 1.0
CE1 A:HIS198 3.1 28.2 1.0
C1C A:CLA606 3.1 22.6 1.0
C1D A:CLA606 3.1 21.9 1.0
C4B A:CLA606 3.1 25.0 1.0
C4C A:CLA606 3.1 22.5 1.0
C1A A:CLA606 3.2 25.1 1.0
CD2 A:HIS198 3.2 25.6 1.0
CHB A:CLA606 3.5 23.9 1.0
CHA A:CLA606 3.5 23.6 1.0
CHC A:CLA606 3.5 26.7 1.0
CHD A:CLA606 3.5 19.3 1.0
CE A:MET183 4.0 21.0 0.3
CE A:MET183 4.1 20.9 0.3
C3D A:CLA606 4.2 20.9 1.0
ND1 A:HIS198 4.3 29.8 1.0
C2D A:CLA606 4.3 23.2 1.0
CE A:MET183 4.3 20.9 0.3
CG A:HIS198 4.4 31.0 1.0
C2C A:CLA606 4.4 23.9 1.0
C3B A:CLA606 4.4 21.4 1.0
C3C A:CLA606 4.4 20.1 1.0
C2B A:CLA606 4.4 23.4 1.0
C3A A:CLA606 4.4 25.1 1.0
C2A A:CLA606 4.5 24.5 1.0
CAB D:CLA403 4.6 25.6 1.0
CBD A:CLA606 4.9 25.0 1.0

Magnesium binding site 2 out of 70 in 8f4i

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Magnesium binding site 2 out of 70 in the Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg607

b:23.7
occ:1.00
MG A:CLA607 0.0 23.7 1.0
NB A:CLA607 2.0 30.6 1.0
ND A:CLA607 2.1 26.7 1.0
NC A:CLA607 2.1 27.1 1.0
O A:HOH820 2.1 24.9 1.0
NA A:CLA607 2.1 26.9 1.0
C4D A:CLA607 2.9 23.8 1.0
C1B A:CLA607 3.0 29.1 1.0
C4B A:CLA607 3.0 30.4 1.0
C1C A:CLA607 3.1 29.3 1.0
C4A A:CLA607 3.1 27.5 1.0
C4C A:CLA607 3.1 29.8 1.0
C1D A:CLA607 3.2 22.6 1.0
C1A A:CLA607 3.2 26.7 1.0
CHC A:CLA607 3.4 28.3 1.0
CHB A:CLA607 3.4 28.1 1.0
CHA A:CLA607 3.5 27.6 1.0
CHD A:CLA607 3.5 24.7 1.0
CBB D:PHO402 4.1 29.3 1.0
C3D A:CLA607 4.2 28.1 1.0
C3B A:CLA607 4.3 31.1 1.0
C2B A:CLA607 4.3 30.3 1.0
O D:HOH594 4.3 28.2 1.0
C2C A:CLA607 4.3 30.6 1.0
C2D A:CLA607 4.4 25.0 1.0
C3C A:CLA607 4.4 26.5 1.0
C3A A:CLA607 4.5 27.3 1.0
C2A A:CLA607 4.5 23.3 1.0
CG2 D:ILE178 4.8 28.7 1.0
CE2 A:PHE206 4.8 23.9 1.0
CBD A:CLA607 4.9 25.9 1.0
CBA A:CLA607 4.9 27.6 1.0

Magnesium binding site 3 out of 70 in 8f4i

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Magnesium binding site 3 out of 70 in the Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg609

b:24.5
occ:1.00
MG A:CLA609 0.0 24.5 1.0
NB A:CLA609 2.0 24.5 1.0
ND A:CLA609 2.0 23.2 1.0
NA A:CLA609 2.0 24.6 1.0
NC A:CLA609 2.1 22.2 1.0
NE2 A:HIS118 2.2 29.0 1.0
C4D A:CLA609 2.9 22.2 1.0
C4A A:CLA609 3.0 24.4 1.0
C1B A:CLA609 3.0 22.6 1.0
CE1 A:HIS118 3.0 26.6 1.0
C1C A:CLA609 3.1 25.5 1.0
C4B A:CLA609 3.1 22.2 1.0
C1A A:CLA609 3.1 23.5 1.0
C4C A:CLA609 3.1 21.1 1.0
C1D A:CLA609 3.2 22.3 1.0
CD2 A:HIS118 3.3 25.9 1.0
CHB A:CLA609 3.4 24.8 1.0
CHA A:CLA609 3.4 22.1 1.0
CHC A:CLA609 3.4 28.4 1.0
CHD A:CLA609 3.6 20.9 1.0
ND1 A:HIS118 4.2 25.1 1.0
C3D A:CLA609 4.3 22.3 1.0
C2B A:CLA609 4.3 25.7 1.0
C2C A:CLA609 4.3 25.4 1.0
C3B A:CLA609 4.3 24.1 1.0
C3A A:CLA609 4.3 28.8 1.0
C3C A:CLA609 4.3 23.2 1.0
CG A:HIS118 4.4 27.6 1.0
C2D A:CLA609 4.4 22.6 1.0
C2A A:CLA609 4.4 29.8 1.0
CG1 I:VAL8 4.4 30.8 1.0
CG2 I:VAL12 4.5 26.4 1.0
CBD A:CLA609 4.9 20.4 1.0
CMA A:CLA609 5.0 28.5 1.0

Magnesium binding site 4 out of 70 in 8f4i

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Magnesium binding site 4 out of 70 in the Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg612

b:21.2
occ:1.00
MG A:CLA612 0.0 21.2 1.0
ND A:CLA612 2.0 25.1 1.0
NC A:CLA612 2.1 18.7 1.0
NB A:CLA612 2.1 24.4 1.0
NA A:CLA612 2.2 23.3 1.0
O A:HOH793 2.2 20.2 1.0
C4D A:CLA612 2.9 24.6 1.0
C1C A:CLA612 3.1 23.5 1.0
C4C A:CLA612 3.1 22.4 1.0
C1D A:CLA612 3.1 23.7 1.0
C4A A:CLA612 3.1 27.9 1.0
C1B A:CLA612 3.1 24.1 1.0
C4B A:CLA612 3.1 23.8 1.0
C1A A:CLA612 3.2 23.6 1.0
CHD A:CLA612 3.5 21.7 1.0
CHC A:CLA612 3.5 22.1 1.0
CHA A:CLA612 3.5 23.4 1.0
CHB A:CLA612 3.5 22.1 1.0
O A:HOH822 4.0 23.6 1.0
CBB A:PHO608 4.2 23.5 1.0
C3D A:CLA612 4.2 22.3 1.0
C2D A:CLA612 4.3 23.8 1.0
C3C A:CLA612 4.3 23.0 1.0
C2C A:CLA612 4.3 27.7 1.0
CG2 A:THR179 4.4 20.9 0.3
C3B A:CLA612 4.4 25.2 1.0
C2B A:CLA612 4.4 20.9 1.0
CG2 A:THR179 4.4 22.6 0.3
C3A A:CLA612 4.5 21.1 1.0
CG2 A:THR179 4.5 24.1 0.3
C2A A:CLA612 4.5 24.1 1.0
OG1 A:THR179 4.5 22.4 0.3
OG1 A:THR179 4.6 27.9 0.3
OG1 A:THR179 4.7 20.3 0.3
CBA A:CLA612 4.8 25.3 1.0
C19 A:PHO608 4.9 31.9 1.0
CBD A:CLA612 4.9 23.1 1.0

Magnesium binding site 5 out of 70 in 8f4i

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Magnesium binding site 5 out of 70 in the Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg601

b:37.5
occ:1.00
MG B:CLA601 0.0 37.5 1.0
NB B:CLA601 2.0 40.9 1.0
ND B:CLA601 2.0 49.6 1.0
NA B:CLA601 2.1 52.4 1.0
NC B:CLA601 2.1 42.9 1.0
O B:HOH717 2.2 41.1 1.0
C4D B:CLA601 2.9 54.3 1.0
C1B B:CLA601 3.0 43.8 1.0
C4B B:CLA601 3.0 42.8 1.0
C4A B:CLA601 3.1 46.1 1.0
C1C B:CLA601 3.1 40.6 1.0
C1A B:CLA601 3.2 50.1 1.0
C1D B:CLA601 3.2 48.3 1.0
C4C B:CLA601 3.2 44.3 1.0
CHB B:CLA601 3.4 45.0 1.0
CHC B:CLA601 3.4 40.3 1.0
CHA B:CLA601 3.5 51.3 1.0
CHD B:CLA601 3.6 45.8 1.0
C9 B:CLA601 3.7 57.5 1.0
C6 B:CLA601 4.1 58.2 1.0
O B:TRP185 4.2 41.0 1.0
C3D B:CLA601 4.3 52.9 1.0
C2B B:CLA601 4.3 43.3 1.0
C3B B:CLA601 4.3 43.0 1.0
C2C B:CLA601 4.4 45.1 1.0
C2D B:CLA601 4.4 51.2 1.0
C3C B:CLA601 4.4 45.0 1.0
C3A B:CLA601 4.4 49.1 1.0
C2A B:CLA601 4.5 55.2 1.0
CE2 B:PHE190 4.6 41.2 1.0
C8 B:CLA601 4.8 59.7 1.0
C7 B:CLA601 4.9 61.1 1.0
CBD B:CLA601 4.9 53.5 1.0
CBB B:CLA602 5.0 35.2 1.0

Magnesium binding site 6 out of 70 in 8f4i

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Magnesium binding site 6 out of 70 in the Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg602

b:28.4
occ:1.00
MG B:CLA602 0.0 28.4 1.0
NB B:CLA602 2.0 33.9 1.0
ND B:CLA602 2.0 32.8 1.0
NC B:CLA602 2.1 33.4 1.0
NA B:CLA602 2.2 29.9 1.0
ND1 B:HIS201 2.2 25.8 1.0
C4D B:CLA602 3.0 27.9 1.0
CE1 B:HIS201 3.0 28.4 1.0
C4B B:CLA602 3.0 29.8 1.0
C1B B:CLA602 3.0 33.3 1.0
C1C B:CLA602 3.1 32.1 1.0
C4A B:CLA602 3.1 32.1 1.0
C4C B:CLA602 3.1 32.5 1.0
C1D B:CLA602 3.1 33.6 1.0
C1A B:CLA602 3.2 28.6 1.0
CG B:HIS201 3.3 22.6 1.0
CHC B:CLA602 3.4 30.5 1.0
CHB B:CLA602 3.5 29.8 1.0
CHD B:CLA602 3.5 31.5 1.0
CHA B:CLA602 3.6 30.0 1.0
CB B:HIS201 3.7 26.9 1.0
NE2 B:HIS201 4.2 25.8 1.0
C3D B:CLA602 4.3 25.6 1.0
CA B:HIS201 4.3 26.6 1.0
C3B B:CLA602 4.3 31.9 1.0
C2B B:CLA602 4.3 28.3 1.0
C2C B:CLA602 4.3 36.1 1.0
CZ H:PHE41 4.3 50.0 1.0
C3C B:CLA602 4.3 30.4 1.0
CD2 B:HIS201 4.3 23.5 1.0
C2D B:CLA602 4.4 28.8 1.0
C3A B:CLA602 4.4 30.9 1.0
C2A B:CLA602 4.5 30.1 1.0
CE1 B:PHE190 4.7 33.8 1.0
CE2 H:PHE41 4.8 51.3 1.0
O B:HIS201 5.0 26.1 1.0
CD1 H:ILE45 5.0 38.2 1.0
CMA B:CLA602 5.0 24.8 1.0

Magnesium binding site 7 out of 70 in 8f4i

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Magnesium binding site 7 out of 70 in the Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg603

b:26.5
occ:1.00
MG B:CLA603 0.0 26.5 1.0
ND B:CLA603 2.1 25.5 1.0
NB B:CLA603 2.1 27.8 1.0
NC B:CLA603 2.1 23.8 1.0
NA B:CLA603 2.1 23.7 1.0
NE2 B:HIS202 2.1 26.3 1.0
C4D B:CLA603 3.0 27.4 1.0
CD2 B:HIS202 3.0 24.7 1.0
C1B B:CLA603 3.1 26.6 1.0
C1C B:CLA603 3.1 28.2 1.0
C4B B:CLA603 3.1 27.8 1.0
C4A B:CLA603 3.1 27.5 1.0
C4C B:CLA603 3.1 23.5 1.0
C1A B:CLA603 3.2 24.5 1.0
C1D B:CLA603 3.2 23.0 1.0
CE1 B:HIS202 3.2 28.7 1.0
CHA B:CLA603 3.5 25.8 1.0
CHB B:CLA603 3.5 25.7 1.0
CHC B:CLA603 3.5 29.2 1.0
CHD B:CLA603 3.6 20.9 1.0
CG B:HIS202 4.2 27.8 1.0
ND1 B:HIS202 4.3 26.0 1.0
C3D B:CLA603 4.3 22.9 1.0
C2B B:CLA603 4.3 25.2 1.0
C3C B:CLA603 4.3 25.5 1.0
C3B B:CLA603 4.4 26.6 1.0
C2C B:CLA603 4.4 24.4 1.0
C2D B:CLA603 4.4 28.4 1.0
C9 B:CLA605 4.4 33.2 1.0
C3A B:CLA603 4.5 26.5 1.0
C2A B:CLA603 4.5 29.9 1.0
C6 B:CLA605 4.6 36.5 1.0
C5 B:CLA605 4.8 29.8 1.0
NE2 B:HIS201 4.9 25.8 1.0
CE2 B:PHE153 4.9 28.4 1.0
CD2 B:HIS201 4.9 23.5 1.0
CBD B:CLA603 4.9 28.9 1.0
CBA B:CLA603 4.9 24.8 1.0

Magnesium binding site 8 out of 70 in 8f4i

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Magnesium binding site 8 out of 70 in the Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg604

b:25.7
occ:1.00
MG B:CLA604 0.0 25.7 1.0
ND B:CLA604 2.0 24.7 1.0
NB B:CLA604 2.1 26.5 1.0
NC B:CLA604 2.1 27.9 1.0
NA B:CLA604 2.2 24.9 1.0
NE2 B:HIS455 2.2 27.0 1.0
C4D B:CLA604 2.9 24.3 1.0
C4B B:CLA604 3.1 27.2 1.0
C1B B:CLA604 3.1 25.5 1.0
C1C B:CLA604 3.1 28.0 1.0
C4A B:CLA604 3.1 27.5 1.0
CD2 B:HIS455 3.1 25.1 1.0
C1D B:CLA604 3.2 24.8 1.0
CE1 B:HIS455 3.2 23.7 1.0
C4C B:CLA604 3.2 27.1 1.0
C1A B:CLA604 3.2 27.8 1.0
CHC B:CLA604 3.4 26.2 1.0
CHB B:CLA604 3.5 28.1 1.0
CHA B:CLA604 3.5 26.9 1.0
CHD B:CLA604 3.6 21.8 1.0
C14 B:CLA612 3.9 31.1 1.0
C3D B:CLA604 4.2 25.4 1.0
ND1 B:HIS455 4.3 22.9 1.0
CG B:HIS455 4.3 25.4 1.0
C3B B:CLA604 4.3 21.3 1.0
C2B B:CLA604 4.3 22.6 1.0
C2D B:CLA604 4.3 25.8 1.0
C2C B:CLA604 4.4 26.2 1.0
C3C B:CLA604 4.4 27.4 1.0
C15 B:CLA612 4.5 36.0 1.0
C3A B:CLA604 4.5 24.8 1.0
C2A B:CLA604 4.5 24.6 1.0
C13 B:CLA612 4.7 34.2 1.0
CBD B:CLA604 5.0 26.1 1.0

Magnesium binding site 9 out of 70 in 8f4i

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Magnesium binding site 9 out of 70 in the Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg605

b:25.6
occ:1.00
MG B:CLA605 0.0 25.6 1.0
ND B:CLA605 2.0 27.3 1.0
NB B:CLA605 2.1 25.2 1.0
NA B:CLA605 2.1 25.7 1.0
NC B:CLA605 2.1 25.7 1.0
NE2 B:HIS100 2.2 25.1 1.0
C4D B:CLA605 2.9 24.2 1.0
C4A B:CLA605 3.1 27.1 1.0
C1B B:CLA605 3.1 25.1 1.0
C4B B:CLA605 3.1 26.3 1.0
C1D B:CLA605 3.1 28.0 1.0
C1A B:CLA605 3.1 27.2 1.0
C1C B:CLA605 3.1 29.1 1.0
C4C B:CLA605 3.2 28.9 1.0
CE1 B:HIS100 3.2 28.4 1.0
CD2 B:HIS100 3.2 25.4 1.0
CHA B:CLA605 3.4 28.7 1.0
CHB B:CLA605 3.4 25.2 1.0
CHC B:CLA605 3.5 25.4 1.0
CHD B:CLA605 3.5 23.5 1.0
C3D B:CLA605 4.2 26.4 1.0
ND1 B:HIS100 4.3 26.6 1.0
C2D B:CLA605 4.3 24.2 1.0
C1 B:CLA604 4.3 31.6 1.0
C2 B:CLA604 4.3 34.9 1.0
C3B B:CLA605 4.4 26.8 1.0
C2B B:CLA605 4.4 29.3 1.0
CG B:HIS100 4.4 26.3 1.0
C2C B:CLA605 4.4 24.9 1.0
C3A B:CLA605 4.4 25.9 1.0
C3C B:CLA605 4.4 28.0 1.0
C2A B:CLA605 4.5 25.4 1.0
CBD B:CLA605 4.9 22.5 1.0
C4 B:CLA606 4.9 25.4 1.0

Magnesium binding site 10 out of 70 in 8f4i

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Magnesium binding site 10 out of 70 in the Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Rt Xfel Structure of Photosystem II 2000 Microseconds After the Third Illumination at 2.00 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg606

b:30.8
occ:1.00
MG B:CLA606 0.0 30.8 1.0
ND B:CLA606 2.0 30.9 1.0
NC B:CLA606 2.1 30.7 1.0
NB B:CLA606 2.1 30.4 1.0
ND1 B:HIS157 2.1 30.6 1.0
NA B:CLA606 2.2 27.9 1.0
CE1 B:HIS157 2.8 27.7 1.0
C4D B:CLA606 3.0 33.3 1.0
C1C B:CLA606 3.1 29.3 1.0
C4B B:CLA606 3.1 29.6 1.0
C1B B:CLA606 3.1 26.7 1.0
C4C B:CLA606 3.1 32.5 1.0
C1D B:CLA606 3.1 33.1 1.0
C4A B:CLA606 3.2 28.6 1.0
C1A B:CLA606 3.3 32.8 1.0
CG B:HIS157 3.4 26.6 1.0
CHC B:CLA606 3.4 30.0 1.0
CHD B:CLA606 3.5 30.4 1.0
CHB B:CLA606 3.5 28.9 1.0
CHA B:CLA606 3.6 32.9 1.0
C8 B:STE621 3.9 36.5 1.0
CB B:HIS157 4.0 27.8 1.0
NE2 B:HIS157 4.0 29.8 1.0
C6 B:STE621 4.2 38.7 1.0
C7 B:STE621 4.3 33.6 1.0
C3D B:CLA606 4.3 34.0 1.0
C2C B:CLA606 4.3 31.8 1.0
CD2 B:HIS157 4.3 26.3 1.0
C3C B:CLA606 4.3 34.4 1.0
C3B B:CLA606 4.3 25.7 1.0
C2B B:CLA606 4.4 32.7 1.0
C2D B:CLA606 4.4 34.6 1.0
C3A B:CLA606 4.5 29.7 1.0
C2A B:CLA606 4.6 29.7 1.0
CD B:PRO164 5.0 30.6 1.0

Reference:

A.Bhowmick, R.Hussein, I.Bogacz, P.S.Simon, M.Ibrahim, R.Chatterjee, M.D.Doyle, M.H.Cheah, T.Fransson, P.Chernev, I.-S.Kim, H.Makita, M.Dasgupta, C.J.Kaminsky, M.Zhang, J.Gatcke, S.Haupt, I.I.Nangca, S.M.Keable, O.Aydin, K.Tono, S.Owada, L.B.Gee, F.D.Fuller, A.Batyuk, R.Alonso-Mori, J.M.Holton, D.W.Paley, N.W.Moriarty, F.Mamedov, P.D.Adams, A.S.Brewster, H.Dobbek, N.K.Sauter, U.Bergmann, A.Zouni, J.Messinger, J.Kern, J.Yano, V.K.Yachandra. Structural Evidence For Intermediates During O2 Formation in Photosystem II To Be Published.
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