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Magnesium in PDB 8g0n: Fphi, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases I, Apo Form

Protein crystallography data

The structure of Fphi, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases I, Apo Form, PDB code: 8g0n was solved by M.Fellner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.54 / 1.14
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 51.457, 60.742, 76.38, 90, 90, 90
R / Rfree (%) 13.2 / 14.5

Other elements in 8g0n:

The structure of Fphi, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases I, Apo Form also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Fphi, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases I, Apo Form (pdb code 8g0n). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Fphi, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases I, Apo Form, PDB code: 8g0n:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 8g0n

Go back to Magnesium Binding Sites List in 8g0n
Magnesium binding site 1 out of 2 in the Fphi, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases I, Apo Form


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Fphi, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases I, Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg301

b:17.7
occ:1.00
O A:HOH417 2.1 18.9 1.0
OE2 A:GLU196 2.1 18.0 1.0
O A:HOH605 2.1 18.7 1.0
O A:HOH549 2.1 19.8 1.0
O A:HOH516 2.1 18.2 1.0
CD A:GLU196 3.1 17.9 1.0
OE1 A:GLU196 3.4 18.6 1.0
HE2 A:HIS200 3.4 17.7 1.0
HZ A:PHE187 3.8 20.7 1.0
O A:HOH586 4.2 29.4 1.0
NE2 A:HIS200 4.3 14.7 1.0
O A:HOH561 4.4 31.1 1.0
CG A:GLU196 4.4 17.2 1.0
HG3 A:GLU196 4.5 20.6 1.0
HE2 A:PHE187 4.6 20.2 1.0
CZ A:PHE187 4.7 17.2 1.0
HG2 A:GLU196 4.8 20.6 1.0
HE1 A:HIS200 4.9 16.9 1.0
O A:HOH589 4.9 43.7 1.0

Magnesium binding site 2 out of 2 in 8g0n

Go back to Magnesium Binding Sites List in 8g0n
Magnesium binding site 2 out of 2 in the Fphi, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases I, Apo Form


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Fphi, Staphylococcus Aureus Fluorophosphonate-Binding Serine Hydrolases I, Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg302

b:27.1
occ:0.91
O A:HOH479 2.0 27.7 1.0
O A:HOH563 2.0 29.1 1.0
O A:HOH405 2.0 28.2 1.0
O A:HOH432 2.1 27.4 1.0
O A:HOH611 2.1 29.4 1.0
OE1 A:GLU38 2.2 24.5 1.0
CD A:GLU38 3.0 20.9 1.0
OE2 A:GLU38 3.1 23.7 1.0
O A:HOH478 4.1 20.9 1.0
OD2 A:ASP41 4.2 19.5 1.0
O A:HOH584 4.3 41.5 1.0
CG A:GLU38 4.5 16.3 1.0
HA A:GLU38 4.6 16.4 1.0
O A:HOH433 4.7 38.5 1.0
HG3 A:GLU38 4.7 19.6 1.0
HB3 A:GLU38 4.9 17.5 1.0

Reference:

M.Fellner, M.Fellner. N/A N/A.
Page generated: Fri Aug 15 05:02:37 2025

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