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Magnesium in PDB 8ohc: Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry E12

Enzymatic activity of Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry E12

All present enzymatic activity of Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry E12:
2.7.7.85;

Protein crystallography data

The structure of Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry E12, PDB code: 8ohc was solved by T.B.Garbers, P.Neumann, J.Wollenhaupt, M.S.Weiss, R.Ficner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.33 / 1.17
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 118.73, 39.33, 68.2, 90, 95.13, 90
R / Rfree (%) 16.2 / 19.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry E12 (pdb code 8ohc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry E12, PDB code: 8ohc:

Magnesium binding site 1 out of 1 in 8ohc

Go back to Magnesium Binding Sites List in 8ohc
Magnesium binding site 1 out of 1 in the Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry E12


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry E12 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg302

b:16.8
occ:1.00
HB2 B:GLU239 3.8 21.0 1.0
O B:HOH481 4.0 20.5 1.0
O B:HOH522 4.1 31.7 1.0
O B:ARG238 4.1 16.4 1.0
O B:HOH577 4.2 49.0 1.0
O B:HOH511 4.3 35.3 1.0
O B:HOH568 4.4 20.1 1.0
O B:HOH576 4.5 29.3 1.0
CB B:GLU239 4.8 17.5 1.0
HG3 B:GLU239 5.0 21.7 1.0

Reference:

T.B.Garbers, P.Neumann, J.Wollenhaupt, M.S.Weiss, R.Ficner. Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X-Entry E12 To Be Published.
Page generated: Fri Oct 4 14:48:38 2024

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