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Magnesium in PDB 8oxm: Atm(Q2971A) Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide

Enzymatic activity of Atm(Q2971A) Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide

All present enzymatic activity of Atm(Q2971A) Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide:
2.7.11.1;

Other elements in 8oxm:

The structure of Atm(Q2971A) Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Atm(Q2971A) Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide (pdb code 8oxm). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Atm(Q2971A) Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide, PDB code: 8oxm:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 8oxm

Go back to Magnesium Binding Sites List in 8oxm
Magnesium binding site 1 out of 2 in the Atm(Q2971A) Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Atm(Q2971A) Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg3102

b:113.9
occ:1.00
OD2 A:ASP2889 2.2 114.2 1.0
O1A A:ANP3101 2.2 123.4 1.0
CG A:ASP2889 2.3 112.1 1.0
N3B A:ANP3101 2.5 127.7 1.0
OD1 A:ASP2889 2.6 114.4 1.0
OD1 A:ASN2875 2.9 106.5 1.0
PG A:ANP3101 3.1 142.4 1.0
CB A:ASP2889 3.3 107.6 1.0
O1G A:ANP3101 3.3 129.7 1.0
O2G A:ANP3101 3.3 132.1 1.0
PA A:ANP3101 3.6 122.3 1.0
PB A:ANP3101 3.8 129.3 1.0
CG A:ASN2875 4.0 107.3 1.0
O3A A:ANP3101 4.0 123.3 1.0
C5' A:ANP3101 4.2 125.2 1.0
CA A:ASP2889 4.3 106.9 1.0
O5' A:ANP3101 4.4 125.2 1.0
O1B A:ANP3101 4.6 125.6 1.0
ND2 A:ASN2875 4.6 105.5 1.0
O2A A:ANP3101 4.7 124.4 1.0
O3G A:ANP3101 4.7 128.7 1.0
NE2 A:HIS2872 4.8 101.5 1.0
CE1 A:HIS2872 4.8 100.9 1.0
OD2 A:ASP2870 4.9 113.1 1.0
O2B A:ANP3101 5.0 125.8 1.0

Magnesium binding site 2 out of 2 in 8oxm

Go back to Magnesium Binding Sites List in 8oxm
Magnesium binding site 2 out of 2 in the Atm(Q2971A) Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Atm(Q2971A) Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg3102

b:110.3
occ:1.00
O1A B:ANP3101 2.1 123.7 1.0
OD2 B:ASP2889 2.1 114.0 1.0
CG B:ASP2889 2.5 112.2 1.0
N3B B:ANP3101 2.6 129.2 1.0
OD1 B:ASN2875 2.9 105.5 1.0
OD1 B:ASP2889 2.9 115.2 1.0
O1G B:ANP3101 3.1 129.6 1.0
PG B:ANP3101 3.1 144.9 1.0
O2G B:ANP3101 3.2 133.2 1.0
CB B:ASP2889 3.5 107.3 1.0
PA B:ANP3101 3.5 122.6 1.0
PB B:ANP3101 4.0 133.3 1.0
CG B:ASN2875 4.0 105.9 1.0
O3A B:ANP3101 4.1 124.0 1.0
C5' B:ANP3101 4.2 124.7 1.0
O5' B:ANP3101 4.4 124.6 1.0
NE2 B:HIS2872 4.4 105.2 1.0
O2A B:ANP3101 4.5 121.8 1.0
CE1 B:HIS2872 4.5 105.0 1.0
CA B:ASP2889 4.6 106.4 1.0
ND2 B:ASN2875 4.6 104.2 1.0
O3G B:ANP3101 4.7 131.1 1.0
O1B B:ANP3101 4.7 126.6 1.0

Reference:

A.C.Howes, O.Perisic, R.L.Williams. Structural Insights Into the Activation of Ataxia-Telangiectasia Mutated By Oxidative Stress To Be Published.
Page generated: Fri Oct 4 15:11:09 2024

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