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Magnesium in PDB 8oxp: Atm(Q2971A) in Complex with Mg Amp-Pnp

Enzymatic activity of Atm(Q2971A) in Complex with Mg Amp-Pnp

All present enzymatic activity of Atm(Q2971A) in Complex with Mg Amp-Pnp:
2.7.11.1;

Other elements in 8oxp:

The structure of Atm(Q2971A) in Complex with Mg Amp-Pnp also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Atm(Q2971A) in Complex with Mg Amp-Pnp (pdb code 8oxp). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Atm(Q2971A) in Complex with Mg Amp-Pnp, PDB code: 8oxp:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 8oxp

Go back to Magnesium Binding Sites List in 8oxp
Magnesium binding site 1 out of 2 in the Atm(Q2971A) in Complex with Mg Amp-Pnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Atm(Q2971A) in Complex with Mg Amp-Pnp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg3102

b:137.1
occ:1.00
OD1 A:ASN2875 2.1 97.0 1.0
OD2 A:ASP2889 3.1 112.2 1.0
O2B A:ANP3101 3.2 135.1 1.0
CG A:ASN2875 3.3 96.2 1.0
N3B A:ANP3101 3.6 135.4 1.0
CE1 A:HIS2872 3.7 96.8 1.0
NE2 A:HIS2872 3.8 97.3 1.0
CG A:ASP2889 3.8 111.2 1.0
CB A:ASP2889 3.9 108.8 1.0
ND2 A:ASN2875 3.9 97.4 1.0
O1A A:ANP3101 3.9 134.7 1.0
O5' A:ANP3101 4.0 136.0 1.0
PB A:ANP3101 4.0 136.6 1.0
O A:GLN2874 4.3 105.8 1.0
CB A:ASN2875 4.5 95.0 1.0
CA A:ASN2875 4.5 94.2 1.0
PA A:ANP3101 4.5 137.6 1.0
C A:GLN2874 4.5 103.4 1.0
N A:ASN2875 4.6 94.7 1.0
CB A:GLN2874 4.8 104.9 1.0
O3A A:ANP3101 4.8 136.0 1.0
OD1 A:ASP2889 4.9 112.0 1.0
PG A:ANP3101 4.9 138.8 1.0
ND1 A:HIS2872 4.9 96.8 1.0

Magnesium binding site 2 out of 2 in 8oxp

Go back to Magnesium Binding Sites List in 8oxp
Magnesium binding site 2 out of 2 in the Atm(Q2971A) in Complex with Mg Amp-Pnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Atm(Q2971A) in Complex with Mg Amp-Pnp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg3102

b:133.8
occ:1.00
OD1 B:ASN2875 2.1 97.5 1.0
OD2 B:ASP2889 3.1 115.7 1.0
O2B B:ANP3101 3.2 138.9 1.0
CG B:ASN2875 3.3 96.4 1.0
N3B B:ANP3101 3.6 139.9 1.0
CE1 B:HIS2872 3.7 98.1 1.0
NE2 B:HIS2872 3.8 98.5 1.0
CG B:ASP2889 3.8 114.8 1.0
CB B:ASP2889 3.9 112.3 1.0
ND2 B:ASN2875 3.9 97.3 1.0
O5' B:ANP3101 4.0 139.9 1.0
O1A B:ANP3101 4.0 138.5 1.0
PB B:ANP3101 4.0 140.8 1.0
O B:GLN2874 4.2 106.1 1.0
CB B:ASN2875 4.5 95.0 1.0
CA B:ASN2875 4.5 94.5 1.0
C B:GLN2874 4.5 103.6 1.0
PA B:ANP3101 4.5 141.5 1.0
N B:ASN2875 4.6 94.7 1.0
CB B:GLN2874 4.8 105.0 1.0
O3A B:ANP3101 4.8 139.9 1.0
OD1 B:ASP2889 4.9 115.7 1.0
PG B:ANP3101 4.9 142.8 1.0
ND1 B:HIS2872 5.0 98.2 1.0
C5' B:ANP3101 5.0 139.5 1.0

Reference:

A.C.Howes, O.Perisic, R.L.Williams. Structural Insights Into the Activation of Ataxia-Telangiectasia Mutated By Oxidative Stress To Be Published.
Page generated: Fri Oct 4 15:11:03 2024

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