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Magnesium in PDB 8rz9: Mutsbeta-Atpgs with Kinked MSH2 Clamp

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Mutsbeta-Atpgs with Kinked MSH2 Clamp (pdb code 8rz9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Mutsbeta-Atpgs with Kinked MSH2 Clamp, PDB code: 8rz9:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 8rz9

Go back to Magnesium Binding Sites List in 8rz9
Magnesium binding site 1 out of 2 in the Mutsbeta-Atpgs with Kinked MSH2 Clamp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Mutsbeta-Atpgs with Kinked MSH2 Clamp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2000

b:15.6
occ:1.00
OG A:SER676 1.8 40.0 0.0
O2G A:AGS2001 2.1 51.0 1.0
O2B A:AGS2001 2.2 61.4 1.0
OD1 A:ASP748 2.9 40.0 0.0
CB A:SER676 3.1 40.0 0.0
PG A:AGS2001 3.5 55.9 1.0
PB A:AGS2001 3.5 68.3 1.0
CG A:ASP748 3.7 40.0 0.0
OD2 A:ASP748 3.8 40.0 0.0
OG1 B:THR951 3.8 63.1 1.0
O1A A:AGS2001 3.9 84.8 1.0
O3B A:AGS2001 4.0 59.8 1.0
CA A:SER676 4.1 66.1 1.0
N A:SER676 4.1 70.7 1.0
OD2 B:ASP943 4.2 40.0 0.0
OD1 B:ASP943 4.2 40.0 0.0
CB B:THR951 4.3 61.5 1.0
O1B A:AGS2001 4.3 70.2 1.0
CG B:ASP943 4.4 40.0 0.0
O3G A:AGS2001 4.4 66.7 1.0
N B:THR951 4.6 62.5 1.0
O3A A:AGS2001 4.6 73.4 1.0
PA A:AGS2001 4.6 80.9 1.0
CB B:SER950 4.8 78.9 1.0
S1G A:AGS2001 4.8 62.4 1.0
O2A A:AGS2001 4.8 82.2 1.0

Magnesium binding site 2 out of 2 in 8rz9

Go back to Magnesium Binding Sites List in 8rz9
Magnesium binding site 2 out of 2 in the Mutsbeta-Atpgs with Kinked MSH2 Clamp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Mutsbeta-Atpgs with Kinked MSH2 Clamp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg2000

b:25.3
occ:1.00
O2B B:AGS2001 2.1 54.1 1.0
OG B:SER903 2.2 40.0 0.0
O2G B:AGS2001 2.3 69.6 1.0
OE2 B:GLU976 3.1 40.0 0.0
OD2 B:ASP975 3.1 76.1 1.0
CB B:SER903 3.4 40.0 0.0
O1A B:AGS2001 3.4 46.5 1.0
PB B:AGS2001 3.6 54.7 1.0
PG B:AGS2001 3.7 67.4 1.0
O3B B:AGS2001 3.9 61.0 1.0
CG B:ASP975 4.0 73.9 1.0
CD B:GLU976 4.0 40.0 0.0
OD1 B:ASP975 4.2 81.3 1.0
CG2 A:THR724 4.3 44.2 1.0
N B:SER903 4.3 57.6 1.0
PA B:AGS2001 4.3 42.0 1.0
CA B:SER903 4.4 52.5 1.0
CB A:SER723 4.4 41.2 1.0
O3A B:AGS2001 4.5 45.2 1.0
O1B B:AGS2001 4.6 57.1 1.0
O2A B:AGS2001 4.6 50.7 1.0
CG B:GLU976 4.6 40.0 0.0
OG1 A:THR724 4.7 44.0 1.0
O3G B:AGS2001 4.7 71.1 1.0
N A:THR724 4.7 39.8 1.0
S1G B:AGS2001 4.7 77.0 1.0
NZ B:LYS902 4.9 60.6 1.0
OE1 B:GLU976 4.9 40.0 0.0

Reference:

J.-H.Lee, M.Thomsen, H.Daub, S.Steinbacher, A.Sztyler, G.Thieulin-Pardo, T.Neudegger, N.Plotnikov, R.R.Iyer, H.Wilkinson, E.Monteagudo, D.P.Felsenfeld, T.Haque, M.Finley, C.Dominguez, T.F.Vogt, B.C.Prasad. Mutsbeta-Atpgs Complex with Kinked MSH2 Clamp To Be Published.
Page generated: Fri Aug 15 14:20:47 2025

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