Magnesium in PDB 8t9s: Structure of GP82 From Mycobacteriophage Phaedrus

The structure of Structure of GP82 From Mycobacteriophage Phaedrus, PDB code: 8t9s was solved by S.A.Binsabaan, A.P.Vandemark, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	14.83 / 1.21
Space group	I 2 3
Cell size a, b, c (Å), α, β, γ (°)	83.893, 83.893, 83.893, 90, 90, 90
R / Rfree (%)	16.7 / 18.6

The binding sites of Magnesium atom in the Structure of GP82 From Mycobacteriophage Phaedrus (pdb code 8t9s). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of GP82 From Mycobacteriophage Phaedrus, PDB code: 8t9s:

Magnesium binding site 1 out of 1 in the Structure of GP82 From Mycobacteriophage Phaedrus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of GP82 From Mycobacteriophage Phaedrus within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg101 b:39.9 occ:1.00 OE2 A:GLU60 2.0 28.6 1.0 O A:HOH244 2.1 38.9 1.0 O A:HOH253 2.2 32.1 1.0 O A:HOH230 2.2 39.4 1.0 O A:HOH232 2.3 50.8 1.0 O A:HOH216 2.3 41.9 1.0 CD A:GLU60 3.0 28.1 1.0 OE1 A:GLU60 3.4 29.7 1.0 O A:HOH238 4.0 36.3 1.0 O A:HOH240 4.3 36.0 1.0 CG A:GLU60 4.4 25.1 1.0 HG2 A:GLU60 4.5 30.2 1.0 HG3 A:GLU60 4.6 30.2 1.0 O A:HOH233 4.8 40.2 1.0

S.A.Binsabaan, K.G.Freeman, G.F.Hatfull, A.P.Vandemark. The Cytotoxic Mycobacteriophage Protein Phaedrus GP82 Interacts with and Modulates the Activity of the Host Atpase, Moxr. J.Mol.Biol. V. 435 68261 2023.
ISSN: ESSN 1089-8638
PubMed: 37678706
DOI: 10.1016/J.JMB.2023.168261