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Magnesium in PDB 8w36: Rabbit Actin in the Absence of Potassium

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Rabbit Actin in the Absence of Potassium (pdb code 8w36). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the Rabbit Actin in the Absence of Potassium, PDB code: 8w36:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in 8w36

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Magnesium binding site 1 out of 5 in the Rabbit Actin in the Absence of Potassium


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Rabbit Actin in the Absence of Potassium within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg402

b:40.5
occ:1.00
O1B D:ADP401 2.0 53.4 1.0
O1A D:ADP401 2.9 48.7 1.0
PB D:ADP401 3.2 40.3 1.0
O3A D:ADP401 3.3 45.1 1.0
PA D:ADP401 3.7 46.3 1.0
O3B D:ADP401 3.9 46.2 1.0
OD2 D:ASP154 4.0 46.6 1.0
CA D:GLY156 4.2 38.2 1.0
OD1 D:ASP154 4.3 44.8 1.0
NZ D:LYS18 4.4 40.7 1.0
N D:GLY156 4.4 36.0 1.0
OD2 D:ASP11 4.4 43.6 1.0
O2B D:ADP401 4.4 39.5 1.0
O2A D:ADP401 4.6 50.1 1.0
CG D:ASP154 4.6 41.7 1.0
OE1 D:GLN137 4.7 43.8 1.0
CA D:GLY301 4.7 35.3 1.0
CG2 D:VAL339 4.9 37.3 1.0
OD1 D:ASP11 4.9 45.4 1.0
O5' D:ADP401 4.9 37.9 1.0

Magnesium binding site 2 out of 5 in 8w36

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Magnesium binding site 2 out of 5 in the Rabbit Actin in the Absence of Potassium


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Rabbit Actin in the Absence of Potassium within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg402

b:40.5
occ:1.00
O1B C:ADP401 2.0 53.4 1.0
O1A C:ADP401 2.9 48.7 1.0
PB C:ADP401 3.2 40.3 1.0
O3A C:ADP401 3.3 45.1 1.0
PA C:ADP401 3.7 46.3 1.0
O3B C:ADP401 3.9 46.2 1.0
OD2 C:ASP154 4.0 46.6 1.0
CA C:GLY156 4.2 38.2 1.0
OD1 C:ASP154 4.3 44.8 1.0
NZ C:LYS18 4.4 40.7 1.0
N C:GLY156 4.4 36.0 1.0
OD2 C:ASP11 4.4 43.6 1.0
O2B C:ADP401 4.4 39.5 1.0
O2A C:ADP401 4.6 50.1 1.0
CG C:ASP154 4.6 41.7 1.0
CA C:GLY301 4.7 35.3 1.0
OE1 C:GLN137 4.7 43.8 1.0
CG2 C:VAL339 4.9 37.3 1.0
OD1 C:ASP11 4.9 45.4 1.0
O5' C:ADP401 4.9 37.9 1.0

Magnesium binding site 3 out of 5 in 8w36

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Magnesium binding site 3 out of 5 in the Rabbit Actin in the Absence of Potassium


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Rabbit Actin in the Absence of Potassium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:40.5
occ:1.00
O1B A:ADP401 2.0 53.4 1.0
O1A A:ADP401 2.9 48.7 1.0
PB A:ADP401 3.2 40.3 1.0
O3A A:ADP401 3.3 45.1 1.0
PA A:ADP401 3.7 46.3 1.0
O3B A:ADP401 3.9 46.2 1.0
OD2 A:ASP154 4.0 46.6 1.0
CA A:GLY156 4.2 38.2 1.0
OD1 A:ASP154 4.3 44.8 1.0
NZ A:LYS18 4.4 40.7 1.0
N A:GLY156 4.4 36.0 1.0
OD2 A:ASP11 4.4 43.6 1.0
O2B A:ADP401 4.4 39.5 1.0
O2A A:ADP401 4.6 50.1 1.0
CG A:ASP154 4.6 41.7 1.0
CA A:GLY301 4.7 35.3 1.0
OE1 A:GLN137 4.7 43.8 1.0
CG2 A:VAL339 4.9 37.3 1.0
OD1 A:ASP11 4.9 45.4 1.0
O5' A:ADP401 4.9 37.9 1.0

Magnesium binding site 4 out of 5 in 8w36

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Magnesium binding site 4 out of 5 in the Rabbit Actin in the Absence of Potassium


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Rabbit Actin in the Absence of Potassium within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg402

b:40.5
occ:1.00
O1B B:ADP401 2.0 53.4 1.0
O1A B:ADP401 2.9 48.7 1.0
PB B:ADP401 3.2 40.3 1.0
O3A B:ADP401 3.3 45.1 1.0
PA B:ADP401 3.7 46.3 1.0
O3B B:ADP401 3.9 46.2 1.0
OD2 B:ASP154 4.0 46.6 1.0
CA B:GLY156 4.2 38.2 1.0
OD1 B:ASP154 4.3 44.8 1.0
NZ B:LYS18 4.4 40.7 1.0
N B:GLY156 4.4 36.0 1.0
OD2 B:ASP11 4.4 43.6 1.0
O2B B:ADP401 4.4 39.5 1.0
O2A B:ADP401 4.6 50.1 1.0
CG B:ASP154 4.6 41.7 1.0
CA B:GLY301 4.7 35.3 1.0
OE1 B:GLN137 4.7 43.8 1.0
CG2 B:VAL339 4.9 37.3 1.0
OD1 B:ASP11 4.9 45.4 1.0
O5' B:ADP401 4.9 37.9 1.0

Magnesium binding site 5 out of 5 in 8w36

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Magnesium binding site 5 out of 5 in the Rabbit Actin in the Absence of Potassium


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Rabbit Actin in the Absence of Potassium within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg402

b:40.5
occ:1.00
O1B E:ADP401 2.0 53.4 1.0
O1A E:ADP401 2.9 48.7 1.0
PB E:ADP401 3.2 40.3 1.0
O3A E:ADP401 3.3 45.1 1.0
PA E:ADP401 3.7 46.3 1.0
O3B E:ADP401 3.9 46.2 1.0
OD2 E:ASP154 4.0 46.6 1.0
CA E:GLY156 4.2 38.2 1.0
OD1 E:ASP154 4.3 44.8 1.0
NZ E:LYS18 4.4 40.7 1.0
N E:GLY156 4.4 36.0 1.0
OD2 E:ASP11 4.4 43.6 1.0
O2B E:ADP401 4.4 39.5 1.0
O2A E:ADP401 4.6 50.1 1.0
CG E:ASP154 4.6 41.7 1.0
CA E:GLY301 4.7 35.3 1.0
OE1 E:GLN137 4.7 43.8 1.0
CG2 E:VAL339 4.9 37.3 1.0
OD1 E:ASP11 4.9 45.4 1.0
O5' E:ADP401 4.9 37.9 1.0

Reference:

N.Volkmann, N.Volkmann. N/A N/A.
Page generated: Fri Aug 15 18:10:50 2025

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