Magnesium in PDB 8w36: Rabbit Actin in the Absence of Potassium
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Rabbit Actin in the Absence of Potassium
(pdb code 8w36). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the
Rabbit Actin in the Absence of Potassium, PDB code: 8w36:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
Magnesium binding site 1 out
of 5 in 8w36
Go back to
Magnesium Binding Sites List in 8w36
Magnesium binding site 1 out
of 5 in the Rabbit Actin in the Absence of Potassium
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Rabbit Actin in the Absence of Potassium within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg402
b:40.5
occ:1.00
|
O1B
|
D:ADP401
|
2.0
|
53.4
|
1.0
|
O1A
|
D:ADP401
|
2.9
|
48.7
|
1.0
|
PB
|
D:ADP401
|
3.2
|
40.3
|
1.0
|
O3A
|
D:ADP401
|
3.3
|
45.1
|
1.0
|
PA
|
D:ADP401
|
3.7
|
46.3
|
1.0
|
O3B
|
D:ADP401
|
3.9
|
46.2
|
1.0
|
OD2
|
D:ASP154
|
4.0
|
46.6
|
1.0
|
CA
|
D:GLY156
|
4.2
|
38.2
|
1.0
|
OD1
|
D:ASP154
|
4.3
|
44.8
|
1.0
|
NZ
|
D:LYS18
|
4.4
|
40.7
|
1.0
|
N
|
D:GLY156
|
4.4
|
36.0
|
1.0
|
OD2
|
D:ASP11
|
4.4
|
43.6
|
1.0
|
O2B
|
D:ADP401
|
4.4
|
39.5
|
1.0
|
O2A
|
D:ADP401
|
4.6
|
50.1
|
1.0
|
CG
|
D:ASP154
|
4.6
|
41.7
|
1.0
|
OE1
|
D:GLN137
|
4.7
|
43.8
|
1.0
|
CA
|
D:GLY301
|
4.7
|
35.3
|
1.0
|
CG2
|
D:VAL339
|
4.9
|
37.3
|
1.0
|
OD1
|
D:ASP11
|
4.9
|
45.4
|
1.0
|
O5'
|
D:ADP401
|
4.9
|
37.9
|
1.0
|
|
Magnesium binding site 2 out
of 5 in 8w36
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Magnesium Binding Sites List in 8w36
Magnesium binding site 2 out
of 5 in the Rabbit Actin in the Absence of Potassium
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Rabbit Actin in the Absence of Potassium within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg402
b:40.5
occ:1.00
|
O1B
|
C:ADP401
|
2.0
|
53.4
|
1.0
|
O1A
|
C:ADP401
|
2.9
|
48.7
|
1.0
|
PB
|
C:ADP401
|
3.2
|
40.3
|
1.0
|
O3A
|
C:ADP401
|
3.3
|
45.1
|
1.0
|
PA
|
C:ADP401
|
3.7
|
46.3
|
1.0
|
O3B
|
C:ADP401
|
3.9
|
46.2
|
1.0
|
OD2
|
C:ASP154
|
4.0
|
46.6
|
1.0
|
CA
|
C:GLY156
|
4.2
|
38.2
|
1.0
|
OD1
|
C:ASP154
|
4.3
|
44.8
|
1.0
|
NZ
|
C:LYS18
|
4.4
|
40.7
|
1.0
|
N
|
C:GLY156
|
4.4
|
36.0
|
1.0
|
OD2
|
C:ASP11
|
4.4
|
43.6
|
1.0
|
O2B
|
C:ADP401
|
4.4
|
39.5
|
1.0
|
O2A
|
C:ADP401
|
4.6
|
50.1
|
1.0
|
CG
|
C:ASP154
|
4.6
|
41.7
|
1.0
|
CA
|
C:GLY301
|
4.7
|
35.3
|
1.0
|
OE1
|
C:GLN137
|
4.7
|
43.8
|
1.0
|
CG2
|
C:VAL339
|
4.9
|
37.3
|
1.0
|
OD1
|
C:ASP11
|
4.9
|
45.4
|
1.0
|
O5'
|
C:ADP401
|
4.9
|
37.9
|
1.0
|
|
Magnesium binding site 3 out
of 5 in 8w36
Go back to
Magnesium Binding Sites List in 8w36
Magnesium binding site 3 out
of 5 in the Rabbit Actin in the Absence of Potassium
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Rabbit Actin in the Absence of Potassium within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg402
b:40.5
occ:1.00
|
O1B
|
A:ADP401
|
2.0
|
53.4
|
1.0
|
O1A
|
A:ADP401
|
2.9
|
48.7
|
1.0
|
PB
|
A:ADP401
|
3.2
|
40.3
|
1.0
|
O3A
|
A:ADP401
|
3.3
|
45.1
|
1.0
|
PA
|
A:ADP401
|
3.7
|
46.3
|
1.0
|
O3B
|
A:ADP401
|
3.9
|
46.2
|
1.0
|
OD2
|
A:ASP154
|
4.0
|
46.6
|
1.0
|
CA
|
A:GLY156
|
4.2
|
38.2
|
1.0
|
OD1
|
A:ASP154
|
4.3
|
44.8
|
1.0
|
NZ
|
A:LYS18
|
4.4
|
40.7
|
1.0
|
N
|
A:GLY156
|
4.4
|
36.0
|
1.0
|
OD2
|
A:ASP11
|
4.4
|
43.6
|
1.0
|
O2B
|
A:ADP401
|
4.4
|
39.5
|
1.0
|
O2A
|
A:ADP401
|
4.6
|
50.1
|
1.0
|
CG
|
A:ASP154
|
4.6
|
41.7
|
1.0
|
CA
|
A:GLY301
|
4.7
|
35.3
|
1.0
|
OE1
|
A:GLN137
|
4.7
|
43.8
|
1.0
|
CG2
|
A:VAL339
|
4.9
|
37.3
|
1.0
|
OD1
|
A:ASP11
|
4.9
|
45.4
|
1.0
|
O5'
|
A:ADP401
|
4.9
|
37.9
|
1.0
|
|
Magnesium binding site 4 out
of 5 in 8w36
Go back to
Magnesium Binding Sites List in 8w36
Magnesium binding site 4 out
of 5 in the Rabbit Actin in the Absence of Potassium
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Rabbit Actin in the Absence of Potassium within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg402
b:40.5
occ:1.00
|
O1B
|
B:ADP401
|
2.0
|
53.4
|
1.0
|
O1A
|
B:ADP401
|
2.9
|
48.7
|
1.0
|
PB
|
B:ADP401
|
3.2
|
40.3
|
1.0
|
O3A
|
B:ADP401
|
3.3
|
45.1
|
1.0
|
PA
|
B:ADP401
|
3.7
|
46.3
|
1.0
|
O3B
|
B:ADP401
|
3.9
|
46.2
|
1.0
|
OD2
|
B:ASP154
|
4.0
|
46.6
|
1.0
|
CA
|
B:GLY156
|
4.2
|
38.2
|
1.0
|
OD1
|
B:ASP154
|
4.3
|
44.8
|
1.0
|
NZ
|
B:LYS18
|
4.4
|
40.7
|
1.0
|
N
|
B:GLY156
|
4.4
|
36.0
|
1.0
|
OD2
|
B:ASP11
|
4.4
|
43.6
|
1.0
|
O2B
|
B:ADP401
|
4.4
|
39.5
|
1.0
|
O2A
|
B:ADP401
|
4.6
|
50.1
|
1.0
|
CG
|
B:ASP154
|
4.6
|
41.7
|
1.0
|
CA
|
B:GLY301
|
4.7
|
35.3
|
1.0
|
OE1
|
B:GLN137
|
4.7
|
43.8
|
1.0
|
CG2
|
B:VAL339
|
4.9
|
37.3
|
1.0
|
OD1
|
B:ASP11
|
4.9
|
45.4
|
1.0
|
O5'
|
B:ADP401
|
4.9
|
37.9
|
1.0
|
|
Magnesium binding site 5 out
of 5 in 8w36
Go back to
Magnesium Binding Sites List in 8w36
Magnesium binding site 5 out
of 5 in the Rabbit Actin in the Absence of Potassium
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Rabbit Actin in the Absence of Potassium within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg402
b:40.5
occ:1.00
|
O1B
|
E:ADP401
|
2.0
|
53.4
|
1.0
|
O1A
|
E:ADP401
|
2.9
|
48.7
|
1.0
|
PB
|
E:ADP401
|
3.2
|
40.3
|
1.0
|
O3A
|
E:ADP401
|
3.3
|
45.1
|
1.0
|
PA
|
E:ADP401
|
3.7
|
46.3
|
1.0
|
O3B
|
E:ADP401
|
3.9
|
46.2
|
1.0
|
OD2
|
E:ASP154
|
4.0
|
46.6
|
1.0
|
CA
|
E:GLY156
|
4.2
|
38.2
|
1.0
|
OD1
|
E:ASP154
|
4.3
|
44.8
|
1.0
|
NZ
|
E:LYS18
|
4.4
|
40.7
|
1.0
|
N
|
E:GLY156
|
4.4
|
36.0
|
1.0
|
OD2
|
E:ASP11
|
4.4
|
43.6
|
1.0
|
O2B
|
E:ADP401
|
4.4
|
39.5
|
1.0
|
O2A
|
E:ADP401
|
4.6
|
50.1
|
1.0
|
CG
|
E:ASP154
|
4.6
|
41.7
|
1.0
|
CA
|
E:GLY301
|
4.7
|
35.3
|
1.0
|
OE1
|
E:GLN137
|
4.7
|
43.8
|
1.0
|
CG2
|
E:VAL339
|
4.9
|
37.3
|
1.0
|
OD1
|
E:ASP11
|
4.9
|
45.4
|
1.0
|
O5'
|
E:ADP401
|
4.9
|
37.9
|
1.0
|
|
Reference:
N.Volkmann,
N.Volkmann.
N/A N/A.
Page generated: Fri Aug 15 18:10:50 2025
|