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Magnesium in PDB 8w6x: Neutron Structure of [Nife]-Hydrogenase From D. Vulgaris Miyazaki F in Its Oxidized State
Enzymatic activity of Neutron Structure of [Nife]-Hydrogenase From D. Vulgaris Miyazaki F in Its Oxidized State
All present enzymatic activity of Neutron Structure of [Nife]-Hydrogenase From D. Vulgaris Miyazaki F in Its Oxidized State:
1.12.2.1;
1.12.2.1;
Protein crystallography data
The structure of Neutron Structure of [Nife]-Hydrogenase From D. Vulgaris Miyazaki F in Its Oxidized State, PDB code: 8w6x
was solved by
T.Hiromoto,
T.Tamada,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | N/A / 1.04 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 66.705, 98.485, 126.86, 90, 90, 90 |
| R / Rfree (%) | 18.9 / 22 |
Other elements in 8w6x:
The structure of Neutron Structure of [Nife]-Hydrogenase From D. Vulgaris Miyazaki F in Its Oxidized State also contains other interesting chemical elements:
| Iron | (Fe) | 12 atoms |
| Chlorine | (Cl) | 1 atom |
| Nickel | (Ni) | 2 atoms |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Neutron Structure of [Nife]-Hydrogenase From D. Vulgaris Miyazaki F in Its Oxidized State
(pdb code 8w6x). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Neutron Structure of [Nife]-Hydrogenase From D. Vulgaris Miyazaki F in Its Oxidized State, PDB code: 8w6x:
In total only one binding site of Magnesium was determined in the Neutron Structure of [Nife]-Hydrogenase From D. Vulgaris Miyazaki F in Its Oxidized State, PDB code: 8w6x:
Magnesium binding site 1 out of 1 in 8w6x
Go back to
Magnesium Binding Sites List in 8w6x
Magnesium binding site 1 out
of 1 in the Neutron Structure of [Nife]-Hydrogenase From D. Vulgaris Miyazaki F in Its Oxidized State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Neutron Structure of [Nife]-Hydrogenase From D. Vulgaris Miyazaki F in Its Oxidized State within 5.0Å range:
|
Reference:
T.Hiromoto,
K.Nishikawa,
S.Inoue,
H.Ogata,
Y.Hori,
K.Kusaka,
Y.Hirano,
K.Kurihara,
Y.Shigeta,
T.Tamada,
Y.Higuchi.
New Insights Into the Oxidation Process From Neutron and X-Ray Crystal Structures of An O2-Sensitive [Nife]-Hydrogenase. Chemical Science 2023.
DOI: 10.1039/D3SC02156D
Page generated: Fri Aug 15 18:17:51 2025
DOI: 10.1039/D3SC02156D
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