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Magnesium in PDB 8yqu: African Swine Fever Virus Rna Polymerase-M1249L COMPLEX1

Enzymatic activity of African Swine Fever Virus Rna Polymerase-M1249L COMPLEX1

All present enzymatic activity of African Swine Fever Virus Rna Polymerase-M1249L COMPLEX1:
2.7.7.6;

Other elements in 8yqu:

The structure of African Swine Fever Virus Rna Polymerase-M1249L COMPLEX1 also contains other interesting chemical elements:

Zinc (Zn) 9 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the African Swine Fever Virus Rna Polymerase-M1249L COMPLEX1 (pdb code 8yqu). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the African Swine Fever Virus Rna Polymerase-M1249L COMPLEX1, PDB code: 8yqu:

Magnesium binding site 1 out of 1 in 8yqu

Go back to Magnesium Binding Sites List in 8yqu
Magnesium binding site 1 out of 1 in the African Swine Fever Virus Rna Polymerase-M1249L COMPLEX1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of African Swine Fever Virus Rna Polymerase-M1249L COMPLEX1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2001

b:37.9
occ:1.00
OD2 A:ASP459 2.0 41.1 1.0
OD1 A:ASP461 2.2 50.6 1.0
CG A:ASP459 2.7 45.5 1.0
OD1 A:ASP459 2.7 55.0 1.0
OD1 A:ASP457 3.0 45.9 1.0
CG A:ASP461 3.0 44.5 1.0
OD2 A:ASP461 3.3 40.5 1.0
O J:ASP1244 3.7 50.1 1.0
CG A:ASP457 3.8 42.8 1.0
OD2 A:ASP457 3.8 42.0 1.0
CB A:ASP459 4.1 27.8 1.0
CB A:ASP461 4.4 35.9 1.0
O J:ASN1245 4.5 58.5 1.0
CA J:ASN1245 4.5 42.5 1.0
O J:ALA1247 4.5 55.0 1.0
N A:ASP461 4.6 43.3 1.0
CB J:GLN1249 4.6 55.5 1.0
CB J:ALA1247 4.6 47.6 1.0
C J:ASN1245 4.7 52.2 1.0
C J:ASP1244 4.7 47.7 1.0
N A:ASP459 4.8 35.6 1.0
CA A:ASP459 4.8 22.2 1.0
C A:ASP459 4.8 30.6 1.0
CA A:ASP461 4.8 37.4 1.0
N A:GLY460 4.9 31.8 1.0
O A:ASP457 5.0 46.3 1.0

Reference:

X.Y.Feng, X.Y.Feng. N/A N/A.
Page generated: Fri Aug 15 21:35:28 2025

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