Magnesium in PDB 9e22: Cryo-Em Structure of Human Cytoplasmic Dynein-1 Bound to LIS1 in the Presence of Atp

The binding sites of Magnesium atom in the Cryo-Em Structure of Human Cytoplasmic Dynein-1 Bound to LIS1 in the Presence of Atp (pdb code 9e22). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of Human Cytoplasmic Dynein-1 Bound to LIS1 in the Presence of Atp, PDB code: 9e22:

Magnesium binding site 1 out of 1 in the Cryo-Em Structure of Human Cytoplasmic Dynein-1 Bound to LIS1 in the Presence of Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Human Cytoplasmic Dynein-1 Bound to LIS1 in the Presence of Atp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg4703 b:71.9 occ:1.00 OE2 A:GLU2344 2.1 85.3 1.0 OG A:SER2231 2.1 79.5 1.0 O3G A:ATP4702 2.5 81.3 1.0 CB A:SER2231 2.8 73.4 1.0 O3A A:ATP4702 3.0 58.6 1.0 O3B A:ATP4702 3.3 70.3 1.0 CD A:GLU2344 3.3 89.3 1.0 O1B A:ATP4702 3.4 69.2 1.0 PB A:ATP4702 3.4 58.4 1.0 PG A:ATP4702 3.4 75.5 1.0 PA A:ATP4702 3.8 62.0 1.0 O1A A:ATP4702 3.9 71.5 1.0 O2G A:ATP4702 3.9 84.7 1.0 N A:SER2231 3.9 67.0 1.0 CA A:SER2231 4.0 67.8 1.0 O2A A:ATP4702 4.0 70.0 1.0 OE1 A:GLU2688 4.0 102.8 1.0 OE1 A:GLU2344 4.1 91.2 1.0 CG A:GLU2344 4.3 89.5 1.0 CG A:LYS2230 4.6 66.5 1.0 O1G A:ATP4702 4.8 68.0 1.0 OD1 A:ASP2304 4.8 87.0 1.0 O2B A:ATP4702 4.9 64.9 1.0 OD2 A:ASP2304 4.9 96.7 1.0 CD A:GLU2688 5.0 104.1 1.0 C A:SER2231 5.0 67.3 1.0

K.H.V.Nguyen, A.A.Kendrick, A.E.Leschziner. Cryo-Em Structure of Pre-Chi Dynein Bound to LIS1 To Be Published.