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Magnesium in PDB 9g0c: Structure of Human MICAL1 BMERB_V978A_V985A Domain:RAB10 Complex.

Enzymatic activity of Structure of Human MICAL1 BMERB_V978A_V985A Domain:RAB10 Complex.

All present enzymatic activity of Structure of Human MICAL1 BMERB_V978A_V985A Domain:RAB10 Complex.:
1.14.13.225; 1.6.3.1;

Protein crystallography data

The structure of Structure of Human MICAL1 BMERB_V978A_V985A Domain:RAB10 Complex., PDB code: 9g0c was solved by A.Rai, R.S.Goody, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.22 / 1.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 53.39, 48.56, 78.77, 90, 97.98, 90
R / Rfree (%) 19.3 / 23.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of Human MICAL1 BMERB_V978A_V985A Domain:RAB10 Complex. (pdb code 9g0c). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Human MICAL1 BMERB_V978A_V985A Domain:RAB10 Complex., PDB code: 9g0c:

Magnesium binding site 1 out of 1 in 9g0c

Go back to Magnesium Binding Sites List in 9g0c
Magnesium binding site 1 out of 1 in the Structure of Human MICAL1 BMERB_V978A_V985A Domain:RAB10 Complex.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Human MICAL1 BMERB_V978A_V985A Domain:RAB10 Complex. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg202

b:35.1
occ:1.00
O2B B:GNP201 1.9 35.4 1.0
OG1 B:THR23 2.0 32.6 1.0
O1G B:GNP201 2.1 33.2 1.0
OG1 B:THR41 2.1 34.0 1.0
O B:HOH305 2.2 35.0 1.0
O B:HOH302 2.3 36.2 1.0
CB B:THR23 3.0 34.7 1.0
PG B:GNP201 3.2 34.0 1.0
CB B:THR41 3.2 31.6 1.0
PB B:GNP201 3.2 33.8 1.0
N3B B:GNP201 3.5 33.2 1.0
N B:THR41 3.7 36.4 1.0
N B:THR23 3.9 31.7 1.0
O2G B:GNP201 3.9 34.0 1.0
O2A B:GNP201 4.0 38.9 1.0
OD2 B:ASP64 4.0 33.6 1.0
CA B:THR23 4.0 33.5 1.0
CA B:THR41 4.1 32.8 1.0
CG2 B:THR23 4.1 39.3 1.0
OD1 B:ASP64 4.1 35.4 1.0
O1B B:GNP201 4.2 35.4 1.0
O3A B:GNP201 4.3 37.5 1.0
CG2 B:THR41 4.3 36.3 1.0
O3G B:GNP201 4.4 36.9 1.0
O B:THR65 4.4 33.6 1.0
CG B:ASP64 4.4 33.7 1.0
O B:HOH338 4.5 36.4 1.0
PA B:GNP201 4.5 39.6 1.0
O1A B:GNP201 4.6 33.8 1.0
O B:ILE39 4.6 41.1 1.0
C B:SER40 4.8 43.1 1.0
CB B:LYS22 4.9 33.0 1.0
C B:LYS22 4.9 34.2 1.0

Reference:

A.Rai, P.Janning, I.R.Vetter, R.S.Goody. Biochemical and Structural Insights Into the Auto-Inhibited State of MICAL1 and Its Activation By RAB8 Elife 2024.
ISSN: ESSN 2050-084X
DOI: 10.7554/ELIFE.102375.1
Page generated: Sat Aug 16 02:32:16 2025

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