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Magnesium in PDB 9gsg: Cryo-Em Structure of Mouse Pmca-Nptn Complex Captured in E2-Pi State (ALF4)

Enzymatic activity of Cryo-Em Structure of Mouse Pmca-Nptn Complex Captured in E2-Pi State (ALF4)

All present enzymatic activity of Cryo-Em Structure of Mouse Pmca-Nptn Complex Captured in E2-Pi State (ALF4):
7.2.2.10;

Other elements in 9gsg:

The structure of Cryo-Em Structure of Mouse Pmca-Nptn Complex Captured in E2-Pi State (ALF4) also contains other interesting chemical elements:

Fluorine (F) 4 atoms
Aluminium (Al) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryo-Em Structure of Mouse Pmca-Nptn Complex Captured in E2-Pi State (ALF4) (pdb code 9gsg). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of Mouse Pmca-Nptn Complex Captured in E2-Pi State (ALF4), PDB code: 9gsg:

Magnesium binding site 1 out of 1 in 9gsg

Go back to Magnesium Binding Sites List in 9gsg
Magnesium binding site 1 out of 1 in the Cryo-Em Structure of Mouse Pmca-Nptn Complex Captured in E2-Pi State (ALF4)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Mouse Pmca-Nptn Complex Captured in E2-Pi State (ALF4) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1302

b:50.3
occ:1.00
F2 A:ALF1301 2.0 50.7 1.0
O A:THR456 2.2 50.3 1.0
OD2 A:ASP454 2.5 50.3 1.0
OD1 A:ASP775 2.6 50.3 1.0
C A:THR456 3.4 50.3 1.0
CG A:ASP454 3.4 50.3 1.0
OD1 A:ASP454 3.7 50.3 1.0
AL A:ALF1301 3.7 50.7 1.0
CG A:ASP775 3.7 50.3 1.0
F4 A:ALF1301 4.0 50.7 1.0
OD2 A:ASP775 4.1 50.3 1.0
CB A:THR456 4.1 50.3 1.0
CA A:THR456 4.1 50.3 1.0
O A:GLY243 4.2 50.3 1.0
F3 A:ALF1301 4.2 50.7 1.0
N A:THR456 4.3 50.3 1.0
N A:GLY457 4.4 50.3 1.0
CA A:GLY457 4.5 50.3 1.0
OD2 A:ASP779 4.6 50.3 1.0
CG2 A:THR456 4.6 50.3 1.0
CA A:GLY243 4.8 50.3 1.0
CB A:ASP454 4.8 50.3 1.0
N A:GLY776 4.8 50.3 1.0
OG1 A:THR458 4.9 50.3 1.0
C A:GLY243 4.9 50.3 1.0
C A:ASP775 5.0 50.3 1.0

Reference:

D.Vinayagam, S.Raunser, O.Sistel, U.Schulte, C.E.Constantin, D.Prumbaum, G.Zolles, B.Fakler. Cryo-Em Structure of Mouse Pmca-Nptn Complex Captured in E2-Pi State (ALF4) To Be Published.
Page generated: Sat Aug 23 05:57:02 2025

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