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Magnesium in PDB 9gsh: Cryo-Em Structure of Pmca-Nptn Complex Captured in E1-Ca-Atp State

Enzymatic activity of Cryo-Em Structure of Pmca-Nptn Complex Captured in E1-Ca-Atp State

All present enzymatic activity of Cryo-Em Structure of Pmca-Nptn Complex Captured in E1-Ca-Atp State:
7.2.2.10;

Other elements in 9gsh:

The structure of Cryo-Em Structure of Pmca-Nptn Complex Captured in E1-Ca-Atp State also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryo-Em Structure of Pmca-Nptn Complex Captured in E1-Ca-Atp State (pdb code 9gsh). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of Pmca-Nptn Complex Captured in E1-Ca-Atp State, PDB code: 9gsh:

Magnesium binding site 1 out of 1 in 9gsh

Go back to Magnesium Binding Sites List in 9gsh
Magnesium binding site 1 out of 1 in the Cryo-Em Structure of Pmca-Nptn Complex Captured in E1-Ca-Atp State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Pmca-Nptn Complex Captured in E1-Ca-Atp State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1303

b:75.9
occ:1.00
O3A A:ANP1301 3.1 97.6 1.0
O1A A:ANP1301 3.6 105.3 1.0
N3B A:ANP1301 3.8 89.5 1.0
O2G A:ANP1301 3.8 89.5 1.0
PA A:ANP1301 4.0 108.0 1.0
PB A:ANP1301 4.0 95.2 1.0
O2B A:ANP1301 4.2 98.5 1.0
OG A:SER559 4.3 134.8 1.0
PG A:ANP1301 4.3 87.7 1.0
O5' A:ANP1301 4.5 103.5 1.0
O3G A:ANP1301 4.7 81.7 1.0
CA A:GLY687 4.8 74.6 1.0

Reference:

D.Vinayagam, S.Raunser, O.Sistel, U.Schulte, C.E.Constantin, D.Prumbaum, G.Zolles, B.Fakler. Cryo-Em Structure of Pmca-Nptn Complex Captured in E1-Ca-Atp State To Be Published.
Page generated: Sat Aug 23 05:57:02 2025

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