Magnesium in PDB 9gz1: Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten
(pdb code 9gz1). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the
Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten, PDB code: 9gz1:
Jump to Magnesium binding site number:
1;
2;
3;
4;
Magnesium binding site 1 out
of 4 in 9gz1
Go back to
Magnesium Binding Sites List in 9gz1
Magnesium binding site 1 out
of 4 in the Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg1201
b:97.7
occ:1.00
|
O2B
|
A:ADP1202
|
1.8
|
91.6
|
1.0
|
O1
|
A:PO41203
|
1.9
|
93.8
|
1.0
|
OG1
|
A:THR185
|
1.9
|
92.9
|
1.0
|
P
|
A:PO41203
|
3.1
|
93.8
|
1.0
|
OG
|
A:SER242
|
3.2
|
85.8
|
1.0
|
CB
|
A:THR185
|
3.2
|
92.9
|
1.0
|
PB
|
A:ADP1202
|
3.3
|
91.6
|
1.0
|
O4
|
A:PO41203
|
3.4
|
93.8
|
1.0
|
O3
|
A:PO41203
|
3.7
|
93.8
|
1.0
|
CB
|
A:SER242
|
3.7
|
85.8
|
1.0
|
N
|
A:SER242
|
3.8
|
85.8
|
1.0
|
O2A
|
A:ADP1202
|
3.8
|
91.6
|
1.0
|
N
|
A:THR185
|
4.0
|
92.9
|
1.0
|
O3B
|
A:ADP1202
|
4.1
|
91.6
|
1.0
|
O1B
|
A:ADP1202
|
4.1
|
91.6
|
1.0
|
CG2
|
A:THR185
|
4.1
|
92.9
|
1.0
|
CA
|
A:THR185
|
4.2
|
92.9
|
1.0
|
O3A
|
A:ADP1202
|
4.2
|
91.6
|
1.0
|
O2
|
A:PO41203
|
4.4
|
93.8
|
1.0
|
CA
|
A:SER242
|
4.4
|
85.8
|
1.0
|
PA
|
A:ADP1202
|
4.5
|
91.6
|
1.0
|
O
|
A:ASN240
|
4.5
|
79.7
|
1.0
|
OE1
|
A:GLU228
|
4.8
|
79.6
|
1.0
|
C
|
A:SER241
|
4.9
|
83.2
|
1.0
|
O1A
|
A:ADP1202
|
4.9
|
91.6
|
1.0
|
CA
|
A:SER241
|
4.9
|
83.2
|
1.0
|
|
Magnesium binding site 2 out
of 4 in 9gz1
Go back to
Magnesium Binding Sites List in 9gz1
Magnesium binding site 2 out
of 4 in the Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg1201
b:94.4
occ:1.00
|
OG1
|
B:THR185
|
1.8
|
90.6
|
1.0
|
O2B
|
B:ADP1202
|
1.9
|
105.3
|
1.0
|
O3B
|
B:ADP1202
|
2.1
|
105.3
|
1.0
|
PB
|
B:ADP1202
|
2.3
|
105.3
|
1.0
|
O1
|
B:PO41203
|
2.9
|
119.8
|
1.0
|
CB
|
B:THR185
|
2.9
|
90.6
|
1.0
|
N
|
B:SER242
|
3.0
|
96.1
|
1.0
|
O2A
|
B:ADP1202
|
3.3
|
105.3
|
1.0
|
O3A
|
B:ADP1202
|
3.4
|
105.3
|
1.0
|
CB
|
B:SER242
|
3.5
|
96.1
|
1.0
|
O1B
|
B:ADP1202
|
3.6
|
105.3
|
1.0
|
OG
|
B:SER242
|
3.6
|
96.1
|
1.0
|
N
|
B:THR185
|
3.6
|
90.6
|
1.0
|
PA
|
B:ADP1202
|
3.8
|
105.3
|
1.0
|
O2
|
B:PO41203
|
3.8
|
119.8
|
1.0
|
CA
|
B:SER242
|
3.8
|
96.1
|
1.0
|
CA
|
B:THR185
|
3.9
|
90.6
|
1.0
|
CA
|
B:SER241
|
3.9
|
116.4
|
1.0
|
C
|
B:SER241
|
3.9
|
116.4
|
1.0
|
P
|
B:PO41203
|
3.9
|
119.8
|
1.0
|
CG2
|
B:THR185
|
4.0
|
90.6
|
1.0
|
O1A
|
B:ADP1202
|
4.1
|
105.3
|
1.0
|
O
|
B:ASN240
|
4.2
|
118.5
|
1.0
|
ND2
|
B:ASN238
|
4.4
|
107.0
|
1.0
|
OD2
|
B:ASP461
|
4.4
|
100.2
|
1.0
|
NZ
|
B:LYS184
|
4.5
|
103.2
|
1.0
|
O3
|
B:PO41203
|
4.5
|
119.8
|
1.0
|
OD1
|
B:ASP461
|
4.5
|
100.2
|
1.0
|
C
|
B:LYS184
|
4.7
|
103.2
|
1.0
|
N
|
B:LYS184
|
4.7
|
103.2
|
1.0
|
C
|
B:SER242
|
4.8
|
96.1
|
1.0
|
O
|
B:SER242
|
4.8
|
96.1
|
1.0
|
CB
|
B:SER241
|
4.8
|
116.4
|
1.0
|
N
|
B:SER241
|
4.9
|
116.4
|
1.0
|
CB
|
B:LYS184
|
4.9
|
103.2
|
1.0
|
C
|
B:ASN240
|
4.9
|
118.5
|
1.0
|
CE
|
B:LYS184
|
4.9
|
103.2
|
1.0
|
CG
|
B:ASP461
|
5.0
|
100.2
|
1.0
|
|
Magnesium binding site 3 out
of 4 in 9gz1
Go back to
Magnesium Binding Sites List in 9gz1
Magnesium binding site 3 out
of 4 in the Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg201
b:184.2
occ:1.00
|
OD2
|
D:ASP41
|
2.2
|
184.0
|
1.0
|
OD1
|
D:ASN39
|
2.9
|
188.3
|
1.0
|
CG
|
D:ASP41
|
3.0
|
184.0
|
1.0
|
OD1
|
D:ASP41
|
3.7
|
184.0
|
1.0
|
CB
|
D:ASP48
|
3.7
|
178.6
|
1.0
|
OD2
|
D:ASP48
|
3.7
|
178.6
|
1.0
|
CG
|
D:ASN39
|
3.8
|
188.3
|
1.0
|
CB
|
D:ASP41
|
3.9
|
184.0
|
1.0
|
CG
|
D:ASP48
|
3.9
|
178.6
|
1.0
|
O
|
D:ILE43
|
4.1
|
183.2
|
1.0
|
CB
|
D:ASN39
|
4.2
|
188.3
|
1.0
|
N
|
D:ASP45
|
4.3
|
184.9
|
1.0
|
CB
|
D:ASP45
|
4.4
|
184.9
|
1.0
|
CA
|
D:ASP48
|
4.6
|
178.6
|
1.0
|
N
|
D:ASP48
|
4.6
|
178.6
|
1.0
|
N
|
D:ASN39
|
4.6
|
188.3
|
1.0
|
ND2
|
D:ASN39
|
4.8
|
188.3
|
1.0
|
OD1
|
D:ASP48
|
4.8
|
178.6
|
1.0
|
CA
|
D:ASP45
|
4.9
|
184.9
|
1.0
|
CA
|
D:ASN39
|
5.0
|
188.3
|
1.0
|
|
Magnesium binding site 4 out
of 4 in 9gz1
Go back to
Magnesium Binding Sites List in 9gz1
Magnesium binding site 4 out
of 4 in the Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Mg201
b:178.8
occ:1.00
|
OD1
|
F:ASP48
|
2.1
|
173.7
|
1.0
|
OD1
|
F:ASP45
|
2.1
|
181.9
|
1.0
|
OD2
|
F:ASP48
|
2.2
|
173.7
|
1.0
|
CG
|
F:ASP48
|
2.3
|
173.7
|
1.0
|
OD1
|
F:ASN39
|
2.4
|
187.8
|
1.0
|
CG
|
F:ASP45
|
2.6
|
181.9
|
1.0
|
N
|
F:ASP45
|
3.0
|
181.9
|
1.0
|
OD2
|
F:ASP45
|
3.1
|
181.9
|
1.0
|
CB
|
F:ASP45
|
3.5
|
181.9
|
1.0
|
CG
|
F:ASN39
|
3.6
|
187.8
|
1.0
|
CB
|
F:ASP48
|
3.7
|
173.7
|
1.0
|
O
|
F:ILE43
|
3.7
|
186.6
|
1.0
|
CA
|
F:ASP45
|
3.8
|
181.9
|
1.0
|
C
|
F:ILE44
|
4.1
|
188.9
|
1.0
|
CA
|
F:ASP48
|
4.2
|
173.7
|
1.0
|
N
|
F:GLN38
|
4.2
|
187.9
|
1.0
|
CA
|
F:ILE44
|
4.3
|
188.9
|
1.0
|
N
|
F:ASP48
|
4.3
|
173.7
|
1.0
|
N
|
F:ASN39
|
4.4
|
187.8
|
1.0
|
O
|
F:ASP45
|
4.4
|
181.9
|
1.0
|
ND2
|
F:ASN39
|
4.4
|
187.8
|
1.0
|
C
|
F:ASP45
|
4.4
|
181.9
|
1.0
|
CB
|
F:GLN38
|
4.5
|
187.9
|
1.0
|
CB
|
F:ASN39
|
4.6
|
187.8
|
1.0
|
C
|
F:ILE43
|
4.7
|
186.6
|
1.0
|
CA
|
F:GLN38
|
4.8
|
187.9
|
1.0
|
N
|
F:ILE44
|
5.0
|
188.9
|
1.0
|
|
Reference:
S.N.Mcmillan,
J.R.T.Pitts,
B.Barua,
D.A.Winkelmann,
C.A.Scarff.
Mavacamten Inhibits Myosin Activity By Stabilising the Myosin Interacting-Heads Motif and Stalling Motor Force Generation. Biorxiv 2025.
ISSN: ISSN 2692-8205
PubMed: 39990378
DOI: 10.1101/2025.02.12.637875
Page generated: Sat Aug 16 03:51:17 2025
|