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Magnesium in PDB 9gz1: Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten (pdb code 9gz1). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten, PDB code: 9gz1:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in 9gz1

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Magnesium binding site 1 out of 4 in the Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1201

b:97.7
occ:1.00
O2B A:ADP1202 1.8 91.6 1.0
O1 A:PO41203 1.9 93.8 1.0
OG1 A:THR185 1.9 92.9 1.0
P A:PO41203 3.1 93.8 1.0
OG A:SER242 3.2 85.8 1.0
CB A:THR185 3.2 92.9 1.0
PB A:ADP1202 3.3 91.6 1.0
O4 A:PO41203 3.4 93.8 1.0
O3 A:PO41203 3.7 93.8 1.0
CB A:SER242 3.7 85.8 1.0
N A:SER242 3.8 85.8 1.0
O2A A:ADP1202 3.8 91.6 1.0
N A:THR185 4.0 92.9 1.0
O3B A:ADP1202 4.1 91.6 1.0
O1B A:ADP1202 4.1 91.6 1.0
CG2 A:THR185 4.1 92.9 1.0
CA A:THR185 4.2 92.9 1.0
O3A A:ADP1202 4.2 91.6 1.0
O2 A:PO41203 4.4 93.8 1.0
CA A:SER242 4.4 85.8 1.0
PA A:ADP1202 4.5 91.6 1.0
O A:ASN240 4.5 79.7 1.0
OE1 A:GLU228 4.8 79.6 1.0
C A:SER241 4.9 83.2 1.0
O1A A:ADP1202 4.9 91.6 1.0
CA A:SER241 4.9 83.2 1.0

Magnesium binding site 2 out of 4 in 9gz1

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Magnesium binding site 2 out of 4 in the Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1201

b:94.4
occ:1.00
OG1 B:THR185 1.8 90.6 1.0
O2B B:ADP1202 1.9 105.3 1.0
O3B B:ADP1202 2.1 105.3 1.0
PB B:ADP1202 2.3 105.3 1.0
O1 B:PO41203 2.9 119.8 1.0
CB B:THR185 2.9 90.6 1.0
N B:SER242 3.0 96.1 1.0
O2A B:ADP1202 3.3 105.3 1.0
O3A B:ADP1202 3.4 105.3 1.0
CB B:SER242 3.5 96.1 1.0
O1B B:ADP1202 3.6 105.3 1.0
OG B:SER242 3.6 96.1 1.0
N B:THR185 3.6 90.6 1.0
PA B:ADP1202 3.8 105.3 1.0
O2 B:PO41203 3.8 119.8 1.0
CA B:SER242 3.8 96.1 1.0
CA B:THR185 3.9 90.6 1.0
CA B:SER241 3.9 116.4 1.0
C B:SER241 3.9 116.4 1.0
P B:PO41203 3.9 119.8 1.0
CG2 B:THR185 4.0 90.6 1.0
O1A B:ADP1202 4.1 105.3 1.0
O B:ASN240 4.2 118.5 1.0
ND2 B:ASN238 4.4 107.0 1.0
OD2 B:ASP461 4.4 100.2 1.0
NZ B:LYS184 4.5 103.2 1.0
O3 B:PO41203 4.5 119.8 1.0
OD1 B:ASP461 4.5 100.2 1.0
C B:LYS184 4.7 103.2 1.0
N B:LYS184 4.7 103.2 1.0
C B:SER242 4.8 96.1 1.0
O B:SER242 4.8 96.1 1.0
CB B:SER241 4.8 116.4 1.0
N B:SER241 4.9 116.4 1.0
CB B:LYS184 4.9 103.2 1.0
C B:ASN240 4.9 118.5 1.0
CE B:LYS184 4.9 103.2 1.0
CG B:ASP461 5.0 100.2 1.0

Magnesium binding site 3 out of 4 in 9gz1

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Magnesium binding site 3 out of 4 in the Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg201

b:184.2
occ:1.00
OD2 D:ASP41 2.2 184.0 1.0
OD1 D:ASN39 2.9 188.3 1.0
CG D:ASP41 3.0 184.0 1.0
OD1 D:ASP41 3.7 184.0 1.0
CB D:ASP48 3.7 178.6 1.0
OD2 D:ASP48 3.7 178.6 1.0
CG D:ASN39 3.8 188.3 1.0
CB D:ASP41 3.9 184.0 1.0
CG D:ASP48 3.9 178.6 1.0
O D:ILE43 4.1 183.2 1.0
CB D:ASN39 4.2 188.3 1.0
N D:ASP45 4.3 184.9 1.0
CB D:ASP45 4.4 184.9 1.0
CA D:ASP48 4.6 178.6 1.0
N D:ASP48 4.6 178.6 1.0
N D:ASN39 4.6 188.3 1.0
ND2 D:ASN39 4.8 188.3 1.0
OD1 D:ASP48 4.8 178.6 1.0
CA D:ASP45 4.9 184.9 1.0
CA D:ASN39 5.0 188.3 1.0

Magnesium binding site 4 out of 4 in 9gz1

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Magnesium binding site 4 out of 4 in the Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Beta-Cardiac Myosin Interacting Heads Motif Complexed to Mavacamten within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg201

b:178.8
occ:1.00
OD1 F:ASP48 2.1 173.7 1.0
OD1 F:ASP45 2.1 181.9 1.0
OD2 F:ASP48 2.2 173.7 1.0
CG F:ASP48 2.3 173.7 1.0
OD1 F:ASN39 2.4 187.8 1.0
CG F:ASP45 2.6 181.9 1.0
N F:ASP45 3.0 181.9 1.0
OD2 F:ASP45 3.1 181.9 1.0
CB F:ASP45 3.5 181.9 1.0
CG F:ASN39 3.6 187.8 1.0
CB F:ASP48 3.7 173.7 1.0
O F:ILE43 3.7 186.6 1.0
CA F:ASP45 3.8 181.9 1.0
C F:ILE44 4.1 188.9 1.0
CA F:ASP48 4.2 173.7 1.0
N F:GLN38 4.2 187.9 1.0
CA F:ILE44 4.3 188.9 1.0
N F:ASP48 4.3 173.7 1.0
N F:ASN39 4.4 187.8 1.0
O F:ASP45 4.4 181.9 1.0
ND2 F:ASN39 4.4 187.8 1.0
C F:ASP45 4.4 181.9 1.0
CB F:GLN38 4.5 187.9 1.0
CB F:ASN39 4.6 187.8 1.0
C F:ILE43 4.7 186.6 1.0
CA F:GLN38 4.8 187.9 1.0
N F:ILE44 5.0 188.9 1.0

Reference:

S.N.Mcmillan, J.R.T.Pitts, B.Barua, D.A.Winkelmann, C.A.Scarff. Mavacamten Inhibits Myosin Activity By Stabilising the Myosin Interacting-Heads Motif and Stalling Motor Force Generation. Biorxiv 2025.
ISSN: ISSN 2692-8205
PubMed: 39990378
DOI: 10.1101/2025.02.12.637875
Page generated: Sat Aug 16 03:51:17 2025

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