Magnesium in PDB 9hdr: Human Line-1 ORF2P Target-Primed Reverse Transcription Complex with En Domain Resolved

All present enzymatic activity of Human Line-1 ORF2P Target-Primed Reverse Transcription Complex with En Domain Resolved:
2.7.7.49;

The structure of Human Line-1 ORF2P Target-Primed Reverse Transcription Complex with En Domain Resolved also contains other interesting chemical elements:

Zinc

(Zn)

1 atom

The binding sites of Magnesium atom in the Human Line-1 ORF2P Target-Primed Reverse Transcription Complex with En Domain Resolved (pdb code 9hdr). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Human Line-1 ORF2P Target-Primed Reverse Transcription Complex with En Domain Resolved, PDB code: 9hdr:

Magnesium binding site 1 out of 1 in the Human Line-1 ORF2P Target-Primed Reverse Transcription Complex with En Domain Resolved


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human Line-1 ORF2P Target-Primed Reverse Transcription Complex with En Domain Resolved within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1301 b:99.3 occ:1.00 O2A A:D3T1303 2.1 86.6 1.0 O A:ALA601 2.1 93.5 1.0 OD2 A:ASP702 2.1 100.5 1.0 OD1 A:ASP600 2.2 136.1 1.0 O2B A:D3T1303 2.2 72.3 1.0 O1G A:D3T1303 2.3 107.3 1.0 CG A:ASP600 3.2 155.8 1.0 C A:ALA601 3.2 91.9 1.0 CG A:ASP702 3.4 82.1 1.0 PA A:D3T1303 3.5 92.2 1.0 PB A:D3T1303 3.5 74.8 1.0 OD2 A:ASP600 3.5 162.6 1.0 N A:ALA601 3.8 85.2 1.0 PG A:D3T1303 3.8 98.4 1.0 O3A A:D3T1303 3.9 88.4 1.0 CA A:ALA601 3.9 89.1 1.0 OD1 A:ASP702 4.0 82.1 1.0 O3B A:D3T1303 4.1 83.6 1.0 CB A:ALA601 4.3 82.4 1.0 C5' A:D3T1303 4.3 72.2 1.0 N A:GLU602 4.3 80.6 1.0 CB A:ALA604 4.3 70.4 1.0 O1A A:D3T1303 4.4 99.9 1.0 CB A:ASP702 4.5 75.5 1.0 C A:ASP600 4.5 88.1 1.0 O5' A:D3T1303 4.5 69.1 1.0 N A:ALA604 4.5 63.3 1.0 N A:LYS603 4.5 62.7 1.0 CB A:ASP600 4.5 154.7 1.0 CA A:GLU602 4.6 75.3 1.0 O3G A:D3T1303 4.6 98.0 1.0 C A:GLU602 4.8 67.3 1.0 O1B A:D3T1303 4.8 68.8 1.0 O2G A:D3T1303 4.9 97.5 1.0 CA A:ASP600 4.9 121.7 1.0

G.E.Ghanim, H.Hu, T.H.D.Nguyen. Structural Mechanism of Line-1 Target-Primed Reverse Transcription To Be Published.