Magnesium in PDB 9iuj: Integrin Alpha-V Beta-3 in Complex with Rhodostomin

The structure of Integrin Alpha-V Beta-3 in Complex with Rhodostomin also contains other interesting chemical elements:

Calcium

(Ca)

7 atoms

The binding sites of Magnesium atom in the Integrin Alpha-V Beta-3 in Complex with Rhodostomin (pdb code 9iuj). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Integrin Alpha-V Beta-3 in Complex with Rhodostomin, PDB code: 9iuj:

Magnesium binding site 1 out of 1 in the Integrin Alpha-V Beta-3 in Complex with Rhodostomin


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Integrin Alpha-V Beta-3 in Complex with Rhodostomin within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg1001 b:16.3 occ:1.00 OG B:SER123 1.6 14.1 1.0 OD1 C:ASP51 2.1 31.0 1.0 OE2 B:GLU220 2.3 14.7 1.0 OG B:SER121 2.5 24.8 1.0 CB B:SER123 2.9 18.3 1.0 CD B:GLU220 3.2 8.2 1.0 CG C:ASP51 3.3 21.3 1.0 CB B:SER121 3.4 8.9 1.0 N B:SER123 3.7 17.6 1.0 OD1 B:ASP251 3.8 25.0 1.0 CA B:SER123 3.9 16.1 1.0 CG B:GLU220 3.9 15.9 1.0 OD2 C:ASP51 4.1 22.6 1.0 CB C:ASP51 4.1 10.2 1.0 OE1 B:GLU220 4.1 4.0 1.0 OD2 B:ASP119 4.1 8.7 1.0 O B:ALA218 4.3 24.6 1.0 CA C:ASP51 4.3 18.8 1.0 CB B:ALA252 4.5 22.2 1.0 C B:SER123 4.5 19.6 1.0 CA B:SER121 4.6 6.1 1.0 N B:TYR122 4.6 15.0 1.0 N B:MET124 4.7 28.7 1.0 C B:SER121 4.7 12.7 1.0 OD1 B:ASP119 4.8 21.6 1.0 CG B:ASP251 4.8 22.9 1.0 CG B:ASP119 4.8 16.7 1.0 C B:TYR122 5.0 13.3 1.0 C C:ASP51 5.0 18.5 1.0 OD2 B:ASP251 5.0 27.6 1.0

Y.T.Wang, W.J.Chuang. Integrin Alpha-V Beta-3 in Complex with Rhodostomin To Be Published.